Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01164 ATGAGTTCAACTCCCACTATGAGATTCAGCGAGCAGGAGCACTTTCATCTTGAGGATACTGGCCAAATAGAGAGGTCCCTTTGGGTGCTGGAACCTCCCAATCCACCACCTTTATGGAACAAGCTATTTAGTCCACTGAAGAAATCCATGTTCTTTTTTTCATCCAAGAAGAAAACTTACCTTGGACGTGTTGTTTCATTCTTAGAGAGTTTATTTCCTATCCTTTGCTGGTTCAAAAATTACAAGGCCTCTAAGTTTAAAAATGATTTGCTAGCCGGTTTAACTCTTGCCAGCCTCAGCATACCTCAGAGTATAGGATATGCTAATTTGGCAAAACTTGATCCTCAGTATGGCTTGTACACCAGTGTTGTTCCTCCTCTTATCTATGCTGTGATGGGGAGTTCAAGAGAAATAGCTATTGGACCTGTAGCTGTAGTATCATTGCTTCTATCCTCCCTAGTCCCCAAAGTGGTAGATCCTGCTGTTGATCCTGATGCCTACAGAAGTGTTGTTTTTACCGTGACCTTATTTGCTGGAATCTTTCAAGCTGCATTCGGTATTTTCAGGTTGGGGTTTCTTGTGGATTTTCTTTCACATGCTGCACTTGTGGGATTCATGGCAGGCGCAGCCATCATTATTGGTCTTCAGCAGCTGAAGGGGTTGCTGGGGGTTACTCACTTTACCAACAAAACTGATGTAATATCCGTGTTGGAGTCTGTATATAAGTCACTCCATCAACAGATAACATCAGGAGAAAAATGGTACCCTCTGAATTTTGTCATTGGGTGTTCATTCCTGATATTCCTTTTAATTGCCCGATTTGTTGGCAGAAGAAACAAAAAACTCTTCTGGTTGCCAGCTATTGCTCCTCTTCTATCAGTTTTACTATCAACTTCAATTGTGTATCTGTCAAAAGCTGATAAGAATGGGGTTAATATAATAAAGCATGTCAAAGGAGGTTTGAATCCAAGTTCAGTTCACAAGTTACAATTCCATGGTCCACATGTTGGACAAACAGCTAAAATTGGATTGATTTCTGCCGTTATTGCTCTCACTGAAGCAATAGCGGTTGGTCGATCTTTTGCTTCCATTAAGGGATACCATCTTGATGGCAACAAAGAAATGTTGGCAATGGGATGCATGAACATTGCGGGATCTCTCTCTTCATGCTATGTGGCAACTGGTTCTTTCTCAAGGACTGCAGTAAATTTCAGTGCAGGATGTCAGACATCAGTATCAAATATTGTGATGGCAGTTACTGTGTTTCTGTGTCTTGAGTTGTTTACTAGGCTTCTATACTACACCCCTATGGCCATACTTGCTTCTATCATCCTCTCTGCACTTCCTGGGTTAATTGACATAAACGAAGCTTGTTATATCTGGAAGGTTGACAAATTTGACTTTCTTGCCTGCATTGGTGCCTTCTTCGGTGTCTTGTTTGTATCAGTCGAAATTGGTCTTCTTGTTGCAGTGTCAATCTCATTTGCAAAGATACTTATACAATCAATTCGACCAGGAATAGAAGTTTTAGGCCGAGTTCCAAGAACAGAAGCTTTCTGCGATGTTAGTCAATATCCTATGGCCACAAGCACTCCAGGCATTTTGGTGATTCGCATAAGCTCTGGCTCACTCTGCTTTGCAAATGCTAATTTTGTTAGAGAAAGAATACTGAAGTGGGTCATCATGGAAGAAGAAAACGAACTTGCCAAGGGAAAGGTCTATGCAGTAATCTTAGACATGGGCAATCTCATGAATGTTGATACTTCTGGGATTCTAGTACTGGAGGAACTGCACAAGAGGTTGCTTTCGCGTGGCGTACAATTGGCCATGGTGAACCCGAGGTGGGTAGTAATTTGGAAGCTGAAAGTGGCACACTTTGTGGATAAAATTGGAAAGAAATGGGTTTTTCTGACTGTTGGTGAAGCCGTAGATGCATGTCTATCTTCAAAACTCCCAGAGCCATGA 1965 0.4173 MSSTPTMRFSEQEHFHLEDTGQIERSLWVLEPPNPPPLWNKLFSPLKKSMFFFSSKKKTYLGRVVSFLESLFPILCWFKNYKASKFKNDLLAGLTLASLSIPQSIGYANLAKLDPQYGLYTSVVPPLIYAVMGSSREIAIGPVAVVSLLLSSLVPKVVDPAVDPDAYRSVVFTVTLFAGIFQAAFGIFRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGVTHFTNKTDVISVLESVYKSLHQQITSGEKWYPLNFVIGCSFLIFLLIARFVGRRNKKLFWLPAIAPLLSVLLSTSIVYLSKADKNGVNIIKHVKGGLNPSSVHKLQFHGPHVGQTAKIGLISAVIALTEAIAVGRSFASIKGYHLDGNKEMLAMGCMNIAGSLSSCYVATGSFSRTAVNFSAGCQTSVSNIVMAVTVFLCLELFTRLLYYTPMAILASIILSALPGLIDINEACYIWKVDKFDFLACIGAFFGVLFVSVEIGLLVAVSISFAKILIQSIRPGIEVLGRVPRTEAFCDVSQYPMATSTPGILVIRISSGSLCFANANFVRERILKWVIMEEENELAKGKVYAVILDMGNLMNVDTSGILVLEELHKRLLSRGVQLAMVNPRWVVIWKLKVAHFVDKIGKKWVFLTVGEAVDACLSSKLPEP 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01164 654 CDD STAS_SulP_like_sulfate_transporter 525 639 - -
Phco7g01164 654 Pfam Sulfate permease family 86 472 IPR011547 GO:0016020
Phco7g01164 654 PANTHER SULFATE TRANSPORTER 55 647 IPR001902 GO:0016020|GO:0055085
Phco7g01164 654 ProSiteProfiles STAS domain profile. 541 646 IPR002645 -
Phco7g01164 654 Pfam STAS domain 525 642 IPR002645 -
Phco7g01164 654 SUPERFAMILY SpoIIaa-like 529 646 IPR036513 -
Phco7g01164 654 ProSitePatterns SLC26A transporters signature. 115 136 IPR018045 GO:0008271|GO:0008272
Phco7g01164 654 NCBIfam sulfate permease 73 642 IPR001902 GO:0016020|GO:0055085
Phco7g01164 654 Gene3D STAS domain 504 649 IPR036513 -
Phco7g01164 654 FunFam Sulfate transporter 31 504 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01164 Phco-Chr7 10038996 10042996 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01164 7 10038996 10042996 Phco7g01164 7 10038996 10042996 ECH
Phco3g01326 3 12816881 12820693 Phco7g01164 7 10038996 10042996 PCT