Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01140 ATGGCAACTGGTGGGTTCTACACAGAAGCAAAACACATTCGATGGGATCAGATATCTCGTGATGTTCATGTGCAAAAAGTCAAGGCCTGCCAACTAATTTGTGACTTTATAAAATTTTATTCTTCGGAAGAATGGAGGGGGAGGCACTCAATCAAGTTTTCGAATCAGGGAAGTATAGCTTTTGTTGGAAATGAGTTCTCACGCCAATTCCATCATGAACAATATGTCGAGGTTTCTTCAATCCTATGGCCTCCATCAAAACAAAAGGCATATATGTTTGAAACTTTGAATATGAGGTTAGAATACTCTATACTGTTCTACAATAGTCTCTGTCCCGTCCTTCCCGTTTCTGACTGCCAGTGCTGCCTAATGCCCAGCTTAGCAGTTGCCGGTATGTGCACTCTTTCTCCAACACTCTCTTCCTTCAAGCACCCCACCCGCTTCTTCCCAGCCTCTGATTTCGCTGCAAAGCTTCGATTTCCCCCTTCAATTCGACTTCGAGCTTCTTCCACTGCCGTCATCAACACCGAAACCAATTCAACAGAATCTGTCGTAGTTGAAAAGGAAGTAGGCAATAGCTGCAACTCGTTGGCCTGTCCTGTTTGTTATGATTCCTTGGCATGGAATGGTGGTCCTGGTTTGTCCATAGATACGATCAGTGGATCTAGTTTTCAATGTGGCACCTGTCAGAAAACATATGTTGGTAACCAAACGCACATTGATCTCACCGCAACAGGTGGAGCTAAGAGCTATGGCGAAACTATGCCAGCTTCCACAGAGCTTTTCAGGGTGCCATTGATATCATTTCTGTATGAGAGGGGCTGGCGTCAAACCTTTTCCGTGTGGGGTGGTTTTCCAGGTCCTGAGAAAGAGTTTGAAATGATGAAGGGTTTCCTAAAGCCAGTATTGGGAGGAAATATAGTTGATGCTAGTTGTGCAAGTGGATTGTTTTCAAGATTATTCGCAAAAAGTGGACTGTTTTCTTTTGTTGTTGCTCTAGACTACTCAGAAAACATGTTACAGCAATGTTACGAATTCATTCAGCAGGAAGAGAACTTTCCAAAAGAGAACTTCATCTTGGTTAGAGCAGACATATCTAGGCTCCCCTTTGTTTCTAATTCTGTTGATGCTTTGCATGCTGGCGCAGCTCTCCACTGTTGGCCTTCACCATTGGCAGCTGTGGCTGAAATAAGTCGTGTTTTACGACCTGGAGGTGTATTTGTCGCAACCACCTACATACTTGATGGTCCTTTGTCTGTTATCCCATTTCGAAGTACATTACGGCAGAATATAAGGCAAGCATCTGGGAGCTACATCTTTCTCTCTGAACGTGAACTTGAAGATCTCTGCAGGGCGTGTGGGCTGGTTGGGTTTAAATGCATTAGAAATGGGCTTTTTGTTATGATCTCTGCTAGAAAGCCCAGTTAA 1428 0.4391 MATGGFYTEAKHIRWDQISRDVHVQKVKACQLICDFIKFYSSEEWRGRHSIKFSNQGSIAFVGNEFSRQFHHEQYVEVSSILWPPSKQKAYMFETLNMRLEYSILFYNSLCPVLPVSDCQCCLMPSLAVAGMCTLSPTLSSFKHPTRFFPASDFAAKLRFPPSIRLRASSTAVINTETNSTESVVVEKEVGNSCNSLACPVCYDSLAWNGGPGLSIDTISGSSFQCGTCQKTYVGNQTHIDLTATGGAKSYGETMPASTELFRVPLISFLYERGWRQTFSVWGGFPGPEKEFEMMKGFLKPVLGGNIVDASCASGLFSRLFAKSGLFSFVVALDYSENMLQQCYEFIQQEENFPKENFILVRADISRLPFVSNSVDALHAGAALHCWPSPLAAVAEISRVLRPGGVFVATTYILDGPLSVIPFRSTLRQNIRQASGSYIFLSERELEDLCRACGLVGFKCIRNGLFVMISARKPS 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01140 475 Gene3D Vaccinia Virus protein VP39 262 473 IPR029063 -
Phco7g01140 475 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 271 473 IPR029063 -
Phco7g01140 475 PANTHER METHYLTRANSFERASE 184 457 - -
Phco7g01140 475 Pfam Methyltransferase domain 309 408 IPR013216 GO:0008168
Phco7g01140 475 CDD AdoMet_MTases 306 414 - -
Phco7g01140 475 FunFam Putative methyltransferase, chloroplastic 262 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01140 Phco-Chr7 9731994 9744894 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01140 7 9731994 9744894 Phco7g01140 7 9731994 9744894 ECH