Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01124 ATGACAATGCAGGAAGGGGACCTCTGCCAGCAACAAAGTACACATTCTCCCCTCACTTTCTTCAATTCAATTTCCGATTATGGTTCCTTCACCGGAGGGTTGTTTCTTGAGCCCAAAATTTCCGATTCTTTTCTGCGTTCGGTTTCTTTAAAGATTCACGCCGCCACTTCTTCCGAATCCAACCCTCGCCGCCAACGGAGGAGGTTTCCGGCCGGGTGTTTCTTATCAGTGAGTTTGCCGACTGCAAAACTCGTCCCCGAACCCAAACTGCCAAATGGCGAACACGTGTCCCACCAGGGCACCACCTCCAACGGCGTCGTCCAGCAAAGAAAGGTTAAGGTGCGTGGAGGCAATGCCGTCAACACCACCAAGCATCTCTGGGCTGGTGCTATTGCCGCTATGGTGTCTAGAACTTGTGTTGCTCCACTTGAAAGACTGAAGTTGGAATACATAGTTCGGGGTGAGAAGAGGAATATATTCGAGCTTATTAGCAAAATTGCCGCTTCTCAAGGGTTGAGAGGCTTTTGGAAAGGGAACCTTGTAAATATTCTGCGAACAGCTCCATTCAAAGCGGTTAATTTTTGTGCCTACGATACTTATAGAAAGCAGTTGCTGAGGTTTTCTGGGAATGAGGAAACTACCAATTTTGAGAGGTTTATTGCTGGTGCTGCTGCTGGGATTACTGCTACCATTATTTGCCTTCCACTTGACACTATCCGAACCAAGTTGGTGGCACCTGGTGGAGAAGCTTTGGGTGGTGTAATTGATGCTTTCCAATACATGATTCGAACTGAAGGATTCTTTTCCCTGTACAAGGGTTTGGTACCATCAATTATAAGTATGGCTCCGTCTGGTGCGGTTTTTTATGGTGTATATGATATACTCAAATCAGCTTATCTGCATTCACCGGAAGGAAAGAAGAGAATAGAGAATATGCATAAACAGGGTCAGGAATTGAATGCCTTTGATCAGCTTGAGTTGGGTCCGGTAAGAACATTGTTGAATGGGGCTATAGCTGGTGCATGTGCAGAAGCTGCTACGTACCCATTTGAAGTGGTGAGGAGGCGACTTCAATTGCAAGTCCAGGCTACCAAATTAAGTTCTTTTGCAACTTTTGTTAAAATAGTTGAACAGGGAGGCATTCCAGCTCTCTATGCAGGACTTGTTCCCAGCTTATTACAGGTACTTCCTTCAGCTTCAATAAGTTTCTTTGTCTATGAGTTCATGAAGATTGTTCTGAAAGTGGAGTAG 1251 0.4548 MTMQEGDLCQQQSTHSPLTFFNSISDYGSFTGGLFLEPKISDSFLRSVSLKIHAATSSESNPRRQRRRFPAGCFLSVSLPTAKLVPEPKLPNGEHVSHQGTTSNGVVQQRKVKVRGGNAVNTTKHLWAGAIAAMVSRTCVAPLERLKLEYIVRGEKRNIFELISKIAASQGLRGFWKGNLVNILRTAPFKAVNFCAYDTYRKQLLRFSGNEETTNFERFIAGAAAGITATIICLPLDTIRTKLVAPGGEALGGVIDAFQYMIRTEGFFSLYKGLVPSIISMAPSGAVFYGVYDILKSAYLHSPEGKKRIENMHKQGQELNAFDQLELGPVRTLLNGAIAGACAEAATYPFEVVRRRLQLQVQATKLSSFATFVKIVEQGGIPALYAGLVPSLLQVLPSASISFFVYEFMKIVLKVE 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01124 416 SUPERFAMILY Mitochondrial carrier 118 409 IPR023395 -
Phco7g01124 416 Gene3D Mitochondrial carrier domain 116 415 IPR023395 -
Phco7g01124 416 ProSiteProfiles Solute carrier (Solcar) repeat profile. 120 203 IPR018108 -
Phco7g01124 416 PANTHER SOLUTE CARRIER FAMILY 25 117 415 - -
Phco7g01124 416 FunFam Mitochondrial substrate carrier family protein 119 416 - -
Phco7g01124 416 PRINTS Mitochondrial carrier protein signature 125 138 IPR002067 GO:0055085
Phco7g01124 416 PRINTS Mitochondrial carrier protein signature 271 289 IPR002067 GO:0055085
Phco7g01124 416 PRINTS Mitochondrial carrier protein signature 228 246 IPR002067 GO:0055085
Phco7g01124 416 PRINTS Mitochondrial carrier protein signature 138 152 IPR002067 GO:0055085
Phco7g01124 416 PRINTS Mitochondrial carrier protein signature 178 198 IPR002067 GO:0055085
Phco7g01124 416 PRINTS Mitochondrial carrier protein signature 336 358 IPR002067 GO:0055085
Phco7g01124 416 ProSiteProfiles Solute carrier (Solcar) repeat profile. 327 412 IPR018108 -
Phco7g01124 416 Pfam Mitochondrial carrier protein 327 413 IPR018108 -
Phco7g01124 416 Pfam Mitochondrial carrier protein 213 300 IPR018108 -
Phco7g01124 416 Pfam Mitochondrial carrier protein 120 205 IPR018108 -
Phco7g01124 416 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 298 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01124 Phco-Chr7 9573793 9576904 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01124 7 9573793 9576904 Phco7g01124 7 9573793 9576904 ECH