Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01117 ATGGATAAGTTGTGCTGTTTTAAGGCTTCCTACTCTCAGCTTGTAGCAGCACGTTCTTCATCCAGCACTGGTAAGGGGAAAAATCATGAAGGCTCAATTAAGTATGGTTTCAGCCTTGTAAAAGGGAAAGCTAATCACCCAATGGAGGATTATCATGTTGCCAAGTTTGCACAGATAAAAGATAATGAATTGGGTTTATTTGCTATCTATGATGGCCACTTGGGTGACCGTGTGCCAGCCTACTTACAAAAACATTTGTTTACCAACATACTGCGGGAGGAGGAATTTTGGGAAGACCCCACTCTTTCCATCTCAAAAGCATACCAGAGCACAGATAAGGAAATTCTATCACACAGTTCTGATCTTGGGCGTGGTGGATCAACAGCCGTAACTGCTATATTGATCAATGGGCGAAGGTTATGGATAGCTAATGTTGGAGACTCACGAGCTGTTCTTTCAAGAAAAGGTCAAGCTGAACAAATGACTACAGACCACGAGCCAAACATGGAACGAGGCAGCATTGAAAATAGAGGTGGCTTTGTCTCTAATTTGCCAGGTGATGTGCCTAGAGTAAATGGACAACTAGCTGTTTCTCGTGCATTTGGAGACAAGAGTCTCAAGTCACATTTGCGATCAGACCCTGATGTACAGAGTACTGACATAGATGTTGATACTGAGATTCTAATCATTGCAAGTGATGGACTTTGGAAGGTAATGACGAATCAAGACGCAGTGGACATTGCTAGAAGATCGAAAGACCCACAGAAGGCAGCTAAGCAACTTACTGCTGAAGCATTAAAAAGAGATAGTAAAGATGATATATCTTGTGTTGTGGTTAAATTCAGATTTTGTGGTTTGAGAATGTTTGATTATTTTCTGCAAAAGTGTGACTACTCAGAATCTGCTGTATATTGTGTTTTTATTCTTCATAAAACACCTAGCGGCTGTGTAAAAGACGAATATGCTTCTAGTTATCGATTGGGGTATAGTGAGTGCAAGGATGATTGGTCCTATTCACGGTTGTATTCCACATTCTTTGATAGACGTGACATGAACCCTTTTTCCTTTGTTCCATTTTCCAAATGA 1086 0.4079 MDKLCCFKASYSQLVAARSSSSTGKGKNHEGSIKYGFSLVKGKANHPMEDYHVAKFAQIKDNELGLFAIYDGHLGDRVPAYLQKHLFTNILREEEFWEDPTLSISKAYQSTDKEILSHSSDLGRGGSTAVTAILINGRRLWIANVGDSRAVLSRKGQAEQMTTDHEPNMERGSIENRGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQSTDIDVDTEILIIASDGLWKVMTNQDAVDIARRSKDPQKAAKQLTAEALKRDSKDDISCVVVKFRFCGLRMFDYFLQKCDYSESAVYCVFILHKTPSGCVKDEYASSYRLGYSECKDDWSYSRLYSTFFDRRDMNPFSFVPFSK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01117 361 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Phco7g01117 361 SMART PP2C_SIG_2 45 281 IPR001932 -
Phco7g01117 361 MobiDBLite consensus disorder prediction 154 174 - -
Phco7g01117 361 FunFam Probable protein phosphatase 2C 39 25 282 - -
Phco7g01117 361 Pfam Protein phosphatase 2C 43 274 IPR001932 -
Phco7g01117 361 Gene3D - 29 285 IPR036457 -
Phco7g01117 361 PANTHER PROTEIN PHOSPHATASE 27 281 IPR015655 GO:0004722|GO:0006470
Phco7g01117 361 CDD PP2Cc 33 281 IPR001932 -
Phco7g01117 361 SMART PP2C_4 30 279 IPR001932 -
Phco7g01117 361 SUPERFAMILY PP2C-like 32 282 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01117 Phco-Chr7 9477189 9479573 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01117 7 9477189 9479573 Phco7g01117 7 9477189 9479573 ECH