Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01114 ATGTCGACGCCGGAAGCGGAAGTGGAACCCTCCTCCAATCACATTGACTCTCTTCCACTAGTTGACCTCCGTCTCCTGTCTCAGCCAGAACTCTACACTCTCTCCCTCTCCGGCGCCACTCATCGCCACCGCCGTGCCAACGACAACGATTCCATCGTTCCCAAAATCGACCGTTCCAATTTCAACGAATCTGCAGGCAGCCGCAAACAGACCTACTCCAAACTCCGCCTCAACAAGCGGAAACAAAATTTCGCGGTTCCCGCCTCCTCTTCTTTCCACATTCCGGAGCCCGTGGACCAAGAAAACTCTCAAATTATCTCTCTGCTGCAGCAACTCTTTGGCGTGGAGCCTCTCCGTAACGCGTTGCGCTCCGACCGGGCTGATGCGGTGGACCACCAACTGTTTCCTGTCCATGTCGAGTTCAAACAACCTCCTCCCGTGACGGTGACGTTTCAGAAGGTCCCGATTGCCGTTATTGATGCTTCTAATAGGAAGAGGAAGCGTGGGCGGCCGAGGAAGAACGAGAATTCGGTATCGGTTTTCGAAGAGGAGACCAAGAAGGTTATCGAAGAGCGCAGCGCGGTGGCCACCCTCAATGAGAGGGGATTTGGTGTGGATGCGGATGGTTTGGATAATGATCCGTTTGGGGAGGAGTTGAAGAGAAGGACCGCTGGGTTGGAGACGGAACCGCAGTTATTGGAATTTTTGGAGACTTTGAATGGAGAGTGGGCCAGTCAAAGGAAGAAGAGGCGGATTGTCCAGGCCAGTGATCTTGGCAACTTGTTGCCTGCCGGATGGAAGATAGTTATTACCCTTTTGAGGAGAGCAGGTCGGGCTTCTGTTGTTTGTCGCCGTTACGTAAGTCCTGGTGGGCGTCAGTTTGAGTCTTGCAAAGAAGCTTCTGCATACTTGCTTTCTGTTTCTGGTGTTCAAGATAAGGGCCATTTCAAATCTAGTTATACTGATGATGGTGCTCAGCAATTGTCCAGTAGTATGAACATGGCATCTGAAAGTAGTGTTGGTCATGTCCCTACTGGAGACGCGAAGACTGATGCCAATGCAAATTATTTGACTTTAGCTGGTGCATCTATTCACTCTGGTCATGAGAAGCAGCCCCCAATATCATCATCATTTGGAAGCGAAAATTTCAATACTGATCTGGCTTTGGGTTGTAAATTAGGAGATGCTAGTGAAGACTTTAGAGGCTTTGACCATCAATCAGAAGATAAAAAACTGTTGGAGGCTGATAAGAATGATGGAAATTCAGTTCAGGGATGTTCTCGCGTGAATGATAGAGTTTGTAATGTAGGTAGTGAGAAGTTGGTTGGTGCTATTGAGTCTACTGATGCTGCATGCAATCTTTATATTCCTTTAGTTTTCTCAACTCCTTTCTCCAATAATAATAGTGACAATGGTCAAATTTCAGAGGATATAAATGCTGCCAAATGCATAAAAGGGGCCATTAGTAATTTTGCTAGTCAGGATAGAAATACTGGATGCCCTGAAACTGTTCCCTGTGGAGTTGACAACAATGGGCTTGGGCTTTCTGTGAAATTAGTAGAAGAGAACACTCATAAAATAAGTTTTGATAGCAGCAGCATACCGGCTCCAAATGCTGAGGGGAAAATATTTGCTGGTAAAAATTTAGGGGATAGACATATGGAGATTAGAGATGAAAAGGCCATTAATGATGACAAACAACTAATTTTGTGTAGCACAGACCAGGCTGAATTTAAAGACGTTTTTACTGATGTTAAACTGCAGAGTAGTTCTGAGGGTTGCTCACTTGTCTCATCTCATTGTGAACTTAAACATACATCTCTAAGTAATATTGACAGGACACAGACTTCTGAGTTGAAGGACTCTGCTGAGGAAAATATTTTTGACAGTGATCTATTTAGCTCATCTATTGATGAAAGAACATGTGTTCACACTGGTTACATTAGTAATGTTTCTTTTAGCTCTTGCACACAAGATGCATCTGAGTTTGGTGGATTTGATTTTGCTTCTGATCTTAAGTTAACTAAGGATGTTAGTGCTGCTAATCATATTCTTTCTAATGAGGATGCTGTGACGAGATGTTTACAGGAAAGGAGTTCCTTGAATGACCAAAATAGCATGATGGACAATCTGTTGCACAGAAGTTCTCAAAGTAACTTATTTGCTCTAACTGCTAATCAGCACCCTTCTGCTTTTCATGATAATGTGAATGATATCTGTGATGAAACCTTTGATGCACTCAAACCTGTTGATGCTGGATACATGGAGCCTCAGTTGGGCATTGTTTCTTGCAGCAATATTGCTGTAGATGCATATACTACTGCAAGCATTATGCAGGGAAACTCACAAGGATGTGTATCTGTTCCTCTTGGTGGAAGTATATTAAACTTTGAAAAGAGAAGTGATGATGGTGTTAATAAATCAAATAAGTCTTGCTTATCAGAAAAGGCTCAGAATGAAGTTGAAGTATTCCAAACTGACACTATGGGTCTTCCCAAATTTCTTTAG 2508 0.4366 MSTPEAEVEPSSNHIDSLPLVDLRLLSQPELYTLSLSGATHRHRRANDNDSIVPKIDRSNFNESAGSRKQTYSKLRLNKRKQNFAVPASSSFHIPEPVDQENSQIISLLQQLFGVEPLRNALRSDRADAVDHQLFPVHVEFKQPPPVTVTFQKVPIAVIDASNRKRKRGRPRKNENSVSVFEEETKKVIEERSAVATLNERGFGVDADGLDNDPFGEELKRRTAGLETEPQLLEFLETLNGEWASQRKKRRIVQASDLGNLLPAGWKIVITLLRRAGRASVVCRRYVSPGGRQFESCKEASAYLLSVSGVQDKGHFKSSYTDDGAQQLSSSMNMASESSVGHVPTGDAKTDANANYLTLAGASIHSGHEKQPPISSSFGSENFNTDLALGCKLGDASEDFRGFDHQSEDKKLLEADKNDGNSVQGCSRVNDRVCNVGSEKLVGAIESTDAACNLYIPLVFSTPFSNNNSDNGQISEDINAAKCIKGAISNFASQDRNTGCPETVPCGVDNNGLGLSVKLVEENTHKISFDSSSIPAPNAEGKIFAGKNLGDRHMEIRDEKAINDDKQLILCSTDQAEFKDVFTDVKLQSSSEGCSLVSSHCELKHTSLSNIDRTQTSELKDSAEENIFDSDLFSSSIDERTCVHTGYISNVSFSSCTQDASEFGGFDFASDLKLTKDVSAANHILSNEDAVTRCLQERSSLNDQNSMMDNLLHRSSQSNLFALTANQHPSAFHDNVNDICDETFDALKPVDAGYMEPQLGIVSCSNIAVDAYTTASIMQGNSQGCVSVPLGGSILNFEKRSDDGVNKSNKSCLSEKAQNEVEVFQTDTMGLPKFL 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01114 835 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 8 374 IPR037472 -
Phco7g01114 835 Pfam Methyl-CpG binding domain 260 304 IPR001739 GO:0003677
Phco7g01114 835 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 252 321 IPR001739 GO:0003677
Phco7g01114 835 SUPERFAMILY DNA-binding domain 258 307 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01114 Phco-Chr7 9455960 9465112 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01114 7 9455960 9465112 Phco7g01114 7 9455960 9465112 ECH