Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01090 ATGGCGCTTCTACGTGTTGTGTGCTTAACTTCTGCAAATCAGTTATCCCCTCAAACCTCTTCCCATTCCATCTCTTTCTCTTCCCTTTCCCAATCCATCAACTTCCCCAATCACTCTTCCTTTCGCCTTCCACGCTTATCCCTTTCCACAACCAAACAAACCCCAAATTTCACTCTCACATGCGTTTCCACTTCCGAACAACAAGCCCAGCCAGTTACAGAAGAAGAATTTTCTCGCACAAGGTTGCTCGCTCAGAACGTGCCCTGGACAAGCACCCCAGAGGATATTCGTTCTTTGTTTGAAAAACATGGAAAAGTCCTTGACGTTGAGCTTTCTATGTATAAGAAAGACAGAAACCGGGGTTTGGCCTTTGTCGAAATGGGGTCCCCAGAAGAGGCTCTCGAAGCTCTCAATAAACTCGAATCGTATGAGTTTGAGGGGCGTGTTATGAGAGTCAATTATGCTCGGCCGAAAAAGAAGAAAACGCCGCCTCCGGTGAAACCAAATTCTGGGGTGACGTTTAACTTGTTTGTTGGTAACTTGTCCTATGAAGCCAAGTCCACGGATCTCAAGGAGTTTTTTAATTCCGGAACTGGTAAAGTTGTTAGAGCTGAGGTTGTATTTCATGAAAATCCTAGGAAGCCGTCAGGTTATGGATTTGTGTCATTCAAGTCCAAGAAAGAAGCTGAGGCAGCTCTTTCTGAGTTCCAAGGAAAGGATTTTATGGGAAGGTCAATCAGGGTGGATCGGGGTCGGCGATTTGTTCAAAAACCTGGGGATAGGACTGCAAAGTCTGTAAATACTCCTTCTGAGTTGAGTGTGAATGGGGCAGAAGCTCAACAGCCAGCAGAGGGGACTCCAAACTCTGAAGATACTCCTGAGTTGAGTGTGAATGGGGCAGAAGCTCAACAGCCAGTAGAAGAGACTCCAAACTCTGAAGAGTTGAGTGTGAATGGGACAGAAGCTGACAAGGCTGATTGA 981 0.4618 MALLRVVCLTSANQLSPQTSSHSISFSSLSQSINFPNHSSFRLPRLSLSTTKQTPNFTLTCVSTSEQQAQPVTEEEFSRTRLLAQNVPWTSTPEDIRSLFEKHGKVLDVELSMYKKDRNRGLAFVEMGSPEEALEALNKLESYEFEGRVMRVNYARPKKKKTPPPVKPNSGVTFNLFVGNLSYEAKSTDLKEFFNSGTGKVVRAEVVFHENPRKPSGYGFVSFKSKKEAEAALSEFQGKDFMGRSIRVDRGRRFVQKPGDRTAKSVNTPSELSVNGAEAQQPAEGTPNSEDTPELSVNGAEAQQPVEETPNSEELSVNGTEADKAD 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01090 326 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 80 157 IPR000504 GO:0003723
Phco7g01090 326 MobiDBLite consensus disorder prediction 252 326 - -
Phco7g01090 326 Gene3D - 52 160 IPR012677 -
Phco7g01090 326 PANTHER OS02G0815200 PROTEIN 25 250 - -
Phco7g01090 326 SUPERFAMILY RNA-binding domain, RBD 80 250 IPR035979 GO:0003676
Phco7g01090 326 CDD RRM_SF 86 153 - -
Phco7g01090 326 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 85 150 IPR000504 GO:0003723
Phco7g01090 326 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 176 247 IPR000504 GO:0003723
Phco7g01090 326 CDD RRM_SF 176 249 - -
Phco7g01090 326 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 174 253 IPR000504 GO:0003723
Phco7g01090 326 Gene3D - 161 266 IPR012677 -
Phco7g01090 326 MobiDBLite consensus disorder prediction 261 318 - -
Phco7g01090 326 SMART rrm1_1 81 153 IPR000504 GO:0003723
Phco7g01090 326 SMART rrm1_1 175 249 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01090 Phco-Chr7 9202864 9204490 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01090 7 9202864 9204490 Phco7g01090 7 9202864 9204490 ECH