Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01085 ATGGAGAATCTTTGCAACGAAGAGACTCATCCTCTCATAAAATCAACATTGCACAACGGATCCAACACTCACACTCACTCTCTCTTCCACCGATCATGTTCTGAATCCAAGAACCTATGGCAAATCGCTGCCCCTTCGATCTTCACCCGCCTAGCCATGTTCTCCATCACCGTCGTCACCCAGTCCTTCGCCGGCCACCTCGCCGACCTCGATCTTGCCGCCATTTCCATCGCTTGCACCGTCCTCATCTCCATCACCTTCGGCTCCATGTTGGGCATGGCGAGTGCACTTGAGACGCTATGCGGCCAGGCCTACGGCGGCGGACAGCACCGCATGTTGGGCGTTTATCTGCAACGCTCGTGGGTTGTTCTGTCCCTGTCCTCAATTCTGATGCTGCCGTTGTTCGTGTTCGCGACGCCGCTGTTGAAGTTGGTGGGGCAGCCCGTCGCGGTGGCGGAACAGGCGGGGCTGCTGGTTGATCCCGTTTCACCTCAGTTTCCCGTTTCAATTCACATTGCAGCGGTTCCTGCAGTGCCAGTTAAAGACCGGATGAGAGTTGGGATCGTCGGCACTGCACTTTCCATTGGTTTCTCGTGGTGGCTCTCGGTTTTGGGAATGCTTGGGTATACACTCTTTGGTGGGTGCCCGTATTCGTGGACTGGTTTTTCTGCTGAAGCTTTTGTGGGTCTCTGGGAATTCTTTAAACTCTCTTTGGCTTCTGGGGTCATGCTTGCGTTAGAGAATTTCTATTACCGACTGTTGCTTATAGTCTCTGGATATATGCATAACACTGAGATTGCAATTGATGCTCTTTCAGTTTGTGTGACGATATTTGGTTGGGAATCCATGGTACCGCTTGCATTTTTGGGTGCAACAGGGGTTCGTGTAGCAAACGAGCTTGGCGCAGGCAATGCAAAAGGTGCGAAATTTGCAACTGTGGTTTCTGTGGTAAATACTGTACTGGTGGGATTTATATTTTGGTTGGTAATTGTGTTCTTCAACAAGAATCTCGCCTTGATCTTTACATCGAGCTCATCCGTTATCCAAATGGTCAATGACCTGACAATGTTGTTAGCTTTTACTGTTCTTCTTAATTGCATTCAACCAGTTCTTTCGGGGGTGGCAGTTGGATGTGGTCGACAAGCAGTGGTGGCATATATAAACATTGGCAGTTACTACTTGGTTGGAATACCTCTGGGGCTTCTCCTATGCTGGTTGCTTCCTTCCAATATTGTTGCAATGTGGAGTGGAATGATGAGTGGAACGGTGGTTCAAACATTGATATTGGCTACAATTACGATGAGATATGATTGGGAAAAAGAGGTTCCTTTTGAATCTGCAGGTTTTATTTTATTGAAATCGATTGCGAGTATCATTGGTGCCTCTCCAGAATCAGCATCTGGGTTAGGCCAGTTTCAACCTGGCATCACCCTTAAGGGAATTGCAGAGGTATATATAGAAAAGAGTGAAGAAGATGAATGTACAATAGTGTTATTTACTTTAGGTTCTACTCTGTTCCTCTGGAGGGTCATGGAGAGCTTCAAGGGAGACGACGAAAGAGCAAAAAAACTTGCGGAAGCTCTTCTACAACCAGAAGATGTGGTTATTCATGCAGAACAACAACACGACCAACCCTACGAGGAACAAAGTTTTGGTAACAAACTCTGGCTCGAAACGAGGAAGCTATGGATAATTGTGGGGCCTTCCATCTTCAGTCGCCTCGCCACCTTTAACATGAACGTCGTCACCCAAGCCTTCGCCGGCCACTTGGGTGATGTCGAACTCGCCGCCATTTCTATAGCTAACACCGTCATCGTTGGCTTCAATTTCGGCCTCCTCCTCGGGATGGCGAGTGCGTTGGAGACACTGTGCGGGCAAGCGTTTGGGGCGAAGAGGTACCACATGTTGGGAATATACATGCAGAGGTCATGGATTGTTCTGTTCCTGTGCTGTTTCCTGCTGTTGCCGTTTTATGTATTCGCAACGCCCCTCCTGAAATTTCTTGGGCAGCCGGATGATGTGGCGGAGTGGAGCGGTGTGGTGGCGGTGTGGCTGATTCCTCTGCACTTCAGTTTTGCGTTTCAGTTCCCTCTGCAAAGGTTCCTACAGTGCCAGCTGAAGACGGCGGTTATTGCGTGGGTATCCTTGGTGGGTTTGGTGGTGAATGTGGTGACTAGTTGGCTCTTGGTGTATGTGTGGGATTTTGGACTTTATGGTGCGGCTATTTCTTTGGACATATCATGGTGGGTTTTGGTTCTTGGCATGTATGCTTATACTGCCTATGGTGGATGCCCTTTAACTTGGACTGGTTTCTCCCTTGAAGCCTTTTCTGGACTCTGGGAATTCCTCAAACTCTCTTCTGCTTCTGGGGTCATGTTATGCTTGGAGAATTGGTACTACAGAATACTTGTCCTTATGACTGGCCAGTTGGAGAATGCCACCATCGCCATTGATGCCTTGTCTGTATGTATGACCATTAATGGGTGGGAGATGATGATTCCACTGGCTTTTTTCGCTGGTACAGGAGTAAGGGTGGCAAACGAGCTAGGTGCAGGGAATGGAAAAGGAGCAAAATTTGCAATGAAAGTGTCAGTAGCACAGTCAATTGTGATTGGGGTCGTGTTATGCGTGCTGATAATGATATTCCATGAGTATTTGGCATACATATTCACCACCAGCTCTTCCGTAATACAAGCCGTTCATAACATGTCATTCCTCCTAGCCCTCACAATTCTTCTCAACAGTGTTCAGCCTATTTTGTCAGGAGTGGCTGTTGGTTCGGGATGGCAAGCATACGTAGCATACATAAATATAGGAAGCTATTACCTCATCGGCCTCCCACTCGGAATTATCATGGGATGGATCTTCAAAACTGGTGTTGCGGGTATATGGGCTGGTATGATCATCGGTGGCACAGCACTTCAAACGTTGATACTCACCATAGTAACAACACGATGTGATTGGGAAATGGAGGCGAACAAAGCTTGCGTTAGAGTAAATAAGTGGTCGAGATCTAACTCCAATGGCGCACTGCAAATCTCCAATTAA 3048 0.4783 MENLCNEETHPLIKSTLHNGSNTHTHSLFHRSCSESKNLWQIAAPSIFTRLAMFSITVVTQSFAGHLADLDLAAISIACTVLISITFGSMLGMASALETLCGQAYGGGQHRMLGVYLQRSWVVLSLSSILMLPLFVFATPLLKLVGQPVAVAEQAGLLVDPVSPQFPVSIHIAAVPAVPVKDRMRVGIVGTALSIGFSWWLSVLGMLGYTLFGGCPYSWTGFSAEAFVGLWEFFKLSLASGVMLALENFYYRLLLIVSGYMHNTEIAIDALSVCVTIFGWESMVPLAFLGATGVRVANELGAGNAKGAKFATVVSVVNTVLVGFIFWLVIVFFNKNLALIFTSSSSVIQMVNDLTMLLAFTVLLNCIQPVLSGVAVGCGRQAVVAYINIGSYYLVGIPLGLLLCWLLPSNIVAMWSGMMSGTVVQTLILATITMRYDWEKEVPFESAGFILLKSIASIIGASPESASGLGQFQPGITLKGIAEVYIEKSEEDECTIVLFTLGSTLFLWRVMESFKGDDERAKKLAEALLQPEDVVIHAEQQHDQPYEEQSFGNKLWLETRKLWIIVGPSIFSRLATFNMNVVTQAFAGHLGDVELAAISIANTVIVGFNFGLLLGMASALETLCGQAFGAKRYHMLGIYMQRSWIVLFLCCFLLLPFYVFATPLLKFLGQPDDVAEWSGVVAVWLIPLHFSFAFQFPLQRFLQCQLKTAVIAWVSLVGLVVNVVTSWLLVYVWDFGLYGAAISLDISWWVLVLGMYAYTAYGGCPLTWTGFSLEAFSGLWEFLKLSSASGVMLCLENWYYRILVLMTGQLENATIAIDALSVCMTINGWEMMIPLAFFAGTGVRVANELGAGNGKGAKFAMKVSVAQSIVIGVVLCVLIMIFHEYLAYIFTTSSSVIQAVHNMSFLLALTILLNSVQPILSGVAVGSGWQAYVAYINIGSYYLIGLPLGIIMGWIFKTGVAGIWAGMIIGGTALQTLILTIVTTRCDWEMEANKACVRVNKWSRSNSNGALQISN 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01085 1015 CDD MATE_eukaryotic 35 442 IPR045069 GO:0042910|GO:1990961
Phco7g01085 1015 CDD MATE_eukaryotic 558 994 IPR045069 GO:0042910|GO:1990961
Phco7g01085 1015 Pfam MatE 45 166 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco7g01085 1015 Pfam MatE 568 728 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco7g01085 1015 Pfam MatE 790 950 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco7g01085 1015 Pfam MatE 241 401 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco7g01085 1015 PANTHER MULTIDRUG RESISTANCE PROTEIN 554 988 - -
Phco7g01085 1015 NCBIfam MATE family efflux transporter 568 964 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01085 Phco-Chr7 9110338 9120101 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01085 7 9110338 9120101 Phco7g01085 7 9110338 9120101 ECH