Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01068 ATGCATCCCTTGAAGTCATTAGTTGTTAGGTCTCGATTTAAAACTCAAAACGACGGCGAAGGGCAGAGGAAGTGTGAATTACATTTGAAAATGCACGGTAGGCCTCGCAAAGCGTTGAAGCAAGAAGATGAAACTGCTTTATCAGCCAAAACTCAAAAGCTTCGTTCACTTCAAGCTCACTTTCTTGCCAATCACCACAATCGCATATATAGCAAGGAAGCTCTAGATGTGAGTGCGAAGCTTCTAGAAGTTAATCCAGAGTGCTACACAGCTTGGAATTACAGAAAACTCGCCGTTCAAAACCTCCTCTCTAACTCTGATTCCGATCCTCAGTCTATCTTCCAAGACGAGCTCAAACTCGTGGAGGTCGCGCTGAGGAAGAATTTCAAGTCTTACGGCGCGTGGCATCACAGAAAATGGGTGCTCAGCCAGGGGCATTCGTCAATCGACAACGAAATGCGCCTTCTGAATGGTTTTCAGAAGGCCGATCCTCGAAATTTTCACGCGTGGAATTACCGAAGGTTTGTGACCGAACTGATGAAACGATCTGATGAGGATGAGTTGAAATACACGGAGGAAGTTATAGGGACTAATTTCAGTAATTACTCTGCATGGCACAATCGTAGTGTGCTTTTGTCTAGTTTGTTGAAAAGAAAGGTTGAAGGATATTTCCCAAAAGAAATTTTTTTGAAAGAGGAGTTTGAGCATGTTCACAATGCTATCTTTACCGATCCAGATGATCAGAGTGGCTGGTTTTATCATCTTTGGCTTATTGATCAAACAGTGAAAACTGATGCTCCTCTACTTGTTTCGTCTTGGCCATCCCATGGGTCTATTATAACTCTAATTAGGGACAACGGCCTTCATGGCTGTGGTTTGTCTCTGCTAAATGGTACACTATCAGACACTGGAACTCTACTGATCATTCTTGATTTCAATCAAGCTGTAGAAGGAATAAACTCATCCACAGTGTCTATTAAATCTGAACTTTTAAAGGAGGAACTTGTTTGGAAACCACTTTCAACGAGCAGTTCAAATACTGCTCAAGTTTGGGTTGTATATCTAAACCTTGGAAATATGGAGCTTCAACCGTCAAAAACCTACTCCGTAGATATCAGCATTGGACATTCTAAGGGTATTGTATCTTCTAATGAAAATCACTACGCTGATCCTTCCCAAATTTCCTTTAAAGTGTTTGTACAGACTGCATCTATTGAGCATTCTGAAGGACAGGGTGGAAAAAGGACTACATGGAAGCATACAAATTTCCATAAAATTGATCATTTTAAGGAATCAGATTCCATTATTTCTGCTGTTCTAAATCACCATATTCCAACAACTTCCAATTGGCACACTGAGGAAATTGGTGAAGAAATAACTAAATTTCGGGACTTATTGTCAGACTATGATTGTAAAATTGGAAAGCTTACACTTGCAAGACTTTTGACTGCTCTTGATTTGTTATCATCTCAACATGATGGAAGAATATCTAACACTGAGGAAATTCTTCAACTTTACACCGATCTGATGAAGTTGGATCCAACACATTCTCTATACTACAAAGACGAGCGTAGTCTAATATCACTAAAGCAGATAACTTCAAGTAGGGACTGTTTACTACCATACTGCCACTACTATAAAGAGGCAACAGAAACAATCACTGGTTACGTTTCTCTACGATTACAAAATCTATCATTGTCACGGCTGGGATCCATTGAGAATTTATTGTGGGTGCAAATGCTAGACCTTAGCCACAACGAACTTCAATCCATTGAAGGATTGGAGGCAATGCAACTTCTATCTTGCTTAAATCTGAGTCATAATAAAATTGGTAGCTTTACTGCTTTGGGGCCTCTCAGATTGGTTAAGTCACTTAAAGTGCTGAATATCTCCTACAATGAGTTGGGTTGTCACTCAGTTGACACAACGAGATACTTGTGCCCGTCTCCTCTATCTCACACTGAAGAATTTGCGTGGGACCGTTTTGAAATCCTCACTGGCAGTGTTAGCGCCACAAAATTCTGGGAAGCTTTCTTGATTTTTGGAAGTTTGGCATTGACAGAATTAAACGTAATAGGGAATGAAGTAGCCGATGAAAATTTCAGGTCATTTCTTGTCAAAGTTTTGCCAACGCTCAAGTGGCTAGATGACGAAGAACTATCTTGA 2166 0.403 MHPLKSLVVRSRFKTQNDGEGQRKCELHLKMHGRPRKALKQEDETALSAKTQKLRSLQAHFLANHHNRIYSKEALDVSAKLLEVNPECYTAWNYRKLAVQNLLSNSDSDPQSIFQDELKLVEVALRKNFKSYGAWHHRKWVLSQGHSSIDNEMRLLNGFQKADPRNFHAWNYRRFVTELMKRSDEDELKYTEEVIGTNFSNYSAWHNRSVLLSSLLKRKVEGYFPKEIFLKEEFEHVHNAIFTDPDDQSGWFYHLWLIDQTVKTDAPLLVSSWPSHGSIITLIRDNGLHGCGLSLLNGTLSDTGTLLIILDFNQAVEGINSSTVSIKSELLKEELVWKPLSTSSSNTAQVWVVYLNLGNMELQPSKTYSVDISIGHSKGIVSSNENHYADPSQISFKVFVQTASIEHSEGQGGKRTTWKHTNFHKIDHFKESDSIISAVLNHHIPTTSNWHTEEIGEEITKFRDLLSDYDCKIGKLTLARLLTALDLLSSQHDGRISNTEEILQLYTDLMKLDPTHSLYYKDERSLISLKQITSSRDCLLPYCHYYKEATETITGYVSLRLQNLSLSRLGSIENLLWVQMLDLSHNELQSIEGLEAMQLLSCLNLSHNKIGSFTALGPLRLVKSLKVLNISYNELGCHSVDTTRYLCPSPLSHTEEFAWDRFEILTGSVSATKFWEAFLIFGSLALTELNVIGNEVADENFRSFLVKVLPTLKWLDDEELS 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01068 721 ProSiteProfiles Leucine-rich repeat profile. 577 598 IPR001611 GO:0005515
Phco7g01068 721 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 183 217 IPR002088 GO:0008318|GO:0018342
Phco7g01068 721 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 229 263 IPR002088 GO:0008318|GO:0018342
Phco7g01068 721 SUPERFAMILY Protein prenylyltransferase 48 524 - -
Phco7g01068 721 ProSiteProfiles Leucine-rich repeat profile. 599 620 IPR001611 GO:0005515
Phco7g01068 721 Gene3D Ribonuclease Inhibitor 545 721 IPR032675 -
Phco7g01068 721 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 113 147 IPR002088 GO:0008318|GO:0018342
Phco7g01068 721 FunFam Geranylgeranyl transferase type-2 subunit alpha 31 273 - -
Phco7g01068 721 Pfam Protein prenyltransferase alpha subunit repeat 72 101 IPR002088 GO:0008318|GO:0018342
Phco7g01068 721 Pfam Protein prenyltransferase alpha subunit repeat 230 260 IPR002088 GO:0008318|GO:0018342
Phco7g01068 721 Pfam Protein prenyltransferase alpha subunit repeat 114 144 IPR002088 GO:0008318|GO:0018342
Phco7g01068 721 Pfam Protein prenyltransferase alpha subunit repeat 150 178 IPR002088 GO:0008318|GO:0018342
Phco7g01068 721 Pfam Protein prenyltransferase alpha subunit repeat 185 214 IPR002088 GO:0008318|GO:0018342
Phco7g01068 721 SUPERFAMILY L domain-like 551 637 - -
Phco7g01068 721 FunFam Rab geranylgeranyl transferase like protein 536 721 - -
Phco7g01068 721 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 70 104 IPR002088 GO:0008318|GO:0018342
Phco7g01068 721 PANTHER PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT 31 530 - -
Phco7g01068 721 Gene3D Protein prenylyltransferase 30 274 - -
Phco7g01068 721 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 148 182 IPR002088 GO:0008318|GO:0018342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01068 7 8825410 8831460 Phco7g01068 7 8825410 8831460 ECH