Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco7g01039 | ATGCGACGAAAGTGTGAGGTAGAATCTTCAAACTTCATCAAATTATCAGCAATTTACCGTAGCAGGCACACCTCTTCGCTCCCATGGATATCTCCTCTCAAATTCACCAAACCCGCACAACCCAAACCGGATCCTCCGCCGGAAACCGCCGTCGAACCTCCGAGGAAGCGGAAGTTCATATCTCACGACGGCGCCATCAATTTAATAAAACGCGAGAAGGACCCGCAGCTCGCCTTGAAGATATTCAACATGGTTTCACAACAGAAGGGATTTCAGCACAACAATGCCACCTACGCCACCATTCTCGAAAAGCTCGCTCGCTGCAACGAGTTCCACGCCGTGGATCGAGTCCTCCACCAAATGACCTACGAAACCTGTAAATTCCACGAGGGTATTTTCGTCAACCTCATGCACCATTTCTCCAAATCCTCCCTTCATGACAAAGTGCTGCAAGCGTTTTTCTCCATTAAACCAATCGTCAGGGACAAACCCTCCCCCAAAGCCCTCACCACTTGCCTCAACCTTTTGCTCGATTCGAACCGCGTCGTTTTGGCTCGAAAATTGCTCTTGCATGCCAAACGCGGTCTAACGCACAAGCCAAACGTTTGCATATTCAACATCCTAGTGAAGTATCACTGCAAGAATGGGGATCTGGAATCTGCTTTTGAAGTTGTGAAGGAAATGAGAAGCTCTGAGTTTTCTTACCCTAATTTAATTACCTACTCGACCCTTATGGATGGGCTTTGTCGAAATGGAAGACTCAGAGAAGCCTTTCAATTGTTTGAGGAAATGGTTTCGAGGGATCACATTGTTCCTGATCCTCTTACTTACAATGTTTTGATCAATGGATTTTGCCGTGAAGGGAAACCTGACCACGCTAGATATGTGATTGAGTTTATGAAGAGTAATGGATGTTATCCGAATGTGTATAATTACTCAGCATTGGTGAATGCTTTGTGTAGAATTGGGAAATTGGAAGACGCAAAAGGGGTTTTGGCTGAGATGAAGAACTCTGGTTTGAAACCGGATGCAGTTACATACACTAGTTTGATCAATTACTTGTGTAGGAATGGACAAGTTGGTGAAGCTATTCAGTTGCTTGAAGAAATGAAGGAGAATAAGATTCAAGCTGACACTGTTGTGTTCAATTTGATACTTGGGGGGTTCTGCAGAGAAGGTAGATATGAGGAGGCTCTAGATATGCTTGAGAAACTCCCACAGCAGGGTGTGTATTTGAACAAAGGTAGTTACAGGATTGTTCTGAATTCCTTGACCCAAAAAGGTGAGTTGAAAAGTGCAAAGGAGTTACTGGGGTTAATGCTAAGTAGGGGTTTTCTGCCCCATTATGCCTCTTCAAATGAATTGTTGGTTTGTCTTTGTAAGGGGGGGATGGCCGATGATGCTGCCAGGGCACTATTTGATTTGGTGGAGATGGGGTTTCAGCCAGGACTTGAGTCTTGGGAAGTTTTAATTGGGTTAATCTGCAGAGACAGGAAGTTGTTGTATGTTTTTGATCTGCTTGATGAATTAGTGAAATCTTTCGCCGAGGGAAAGGATGATGTAGAGGTTTTATGTTCAGCAAGAAATAGGAATGCGATTGATGACGTTAAAATGTGGCAAGGCATCCCCTATCAAATTTTTCAAGAGGACATTTGTGACATCAGATGA | 1668 | 0.4412 | MRRKCEVESSNFIKLSAIYRSRHTSSLPWISPLKFTKPAQPKPDPPPETAVEPPRKRKFISHDGAINLIKREKDPQLALKIFNMVSQQKGFQHNNATYATILEKLARCNEFHAVDRVLHQMTYETCKFHEGIFVNLMHHFSKSSLHDKVLQAFFSIKPIVRDKPSPKALTTCLNLLLDSNRVVLARKLLLHAKRGLTHKPNVCIFNILVKYHCKNGDLESAFEVVKEMRSSEFSYPNLITYSTLMDGLCRNGRLREAFQLFEEMVSRDHIVPDPLTYNVLINGFCREGKPDHARYVIEFMKSNGCYPNVYNYSALVNALCRIGKLEDAKGVLAEMKNSGLKPDAVTYTSLINYLCRNGQVGEAIQLLEEMKENKIQADTVVFNLILGGFCREGRYEEALDMLEKLPQQGVYLNKGSYRIVLNSLTQKGELKSAKELLGLMLSRGFLPHYASSNELLVCLCKGGMADDAARALFDLVEMGFQPGLESWEVLIGLICRDRKLLYVFDLLDELVKSFAEGKDDVEVLCSARNRNAIDDVKMWQGIPYQIFQEDICDIR | 555 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco7g01039 | 555 | Gene3D | Tetratricopeptide repeat domain | 397 | 541 | IPR011990 | GO:0005515 | |
| Phco7g01039 | 555 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 273 | 307 | IPR002885 | - | |
| Phco7g01039 | 555 | Gene3D | Tetratricopeptide repeat domain | 287 | 396 | IPR011990 | GO:0005515 | |
| Phco7g01039 | 555 | Gene3D | Tetratricopeptide repeat domain | 52 | 158 | IPR011990 | GO:0005515 | |
| Phco7g01039 | 555 | Gene3D | Tetratricopeptide repeat domain | 160 | 286 | IPR011990 | GO:0005515 | |
| Phco7g01039 | 555 | PANTHER | RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED | 236 | 527 | - | - | |
| Phco7g01039 | 555 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 308 | 342 | IPR002885 | - | |
| Phco7g01039 | 555 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 378 | 412 | IPR002885 | - | |
| Phco7g01039 | 555 | SUPERFAMILY | HCP-like | 249 | 445 | - | - | |
| Phco7g01039 | 555 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 201 | 235 | IPR002885 | - | |
| Phco7g01039 | 555 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 237 | 271 | IPR002885 | - | |
| Phco7g01039 | 555 | MobiDBLite | consensus disorder prediction | 32 | 54 | - | - | |
| Phco7g01039 | 555 | Pfam | PPR repeat | 198 | 229 | IPR002885 | - | |
| Phco7g01039 | 555 | Pfam | PPR repeat | 303 | 336 | IPR002885 | - | |
| Phco7g01039 | 555 | Pfam | PPR repeat | 339 | 371 | IPR002885 | - | |
| Phco7g01039 | 555 | NCBIfam | pentatricopeptide repeat | 276 | 309 | IPR002885 | - | |
| Phco7g01039 | 555 | NCBIfam | pentatricopeptide repeat | 204 | 236 | IPR002885 | - | |
| Phco7g01039 | 555 | NCBIfam | pentatricopeptide repeat | 345 | 378 | IPR002885 | - | |
| Phco7g01039 | 555 | NCBIfam | pentatricopeptide repeat | 416 | 447 | IPR002885 | - | |
| Phco7g01039 | 555 | NCBIfam | pentatricopeptide repeat | 380 | 413 | IPR002885 | - | |
| Phco7g01039 | 555 | NCBIfam | pentatricopeptide repeat | 239 | 273 | IPR002885 | - | |
| Phco7g01039 | 555 | NCBIfam | pentatricopeptide repeat | 312 | 344 | IPR002885 | - | |
| Phco7g01039 | 555 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 413 | 447 | IPR002885 | - | |
| Phco7g01039 | 555 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 343 | 377 | IPR002885 | - | |
| Phco7g01039 | 555 | Pfam | PPR repeat family | 378 | 424 | IPR002885 | - | |
| Phco7g01039 | 555 | Pfam | PPR repeat family | 236 | 286 | IPR002885 | - |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco7g01039 | 7 | 8543585 | 8545322 | Phco7g01039 | 7 | 8543585 | 8545322 | ECH |