Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01036 ATGACCAGCACAAATGCAGAATTGTCTCAGGGAAATGGTAGTGCTTCTTTTTGTTCTATTAACTCCCAATCTGGGTCACAAGAGCATCCACAAAGTGGCACTGGCAATATGATTTTCAAAAGTGGACCACTTTTCATATCATCTAAAGGAATTGGATGGACATCTTGGAAAAAAAGATGGTTTATTTTAACACAAACTTCACTTGTTTTCTTCAGAAGTGATCCAAATGCAATCCCTCAAAAGGGGAATGAAGTTAATTTGACCCTTGGAGGCATTGACCTCAACAATTCAGGCAGTGTTGTTATCAAAGCAGATAAGAAACTTTTGACTGTACAATTTCCTGATGTTCATGATGGACGAGCATTCACACTTAAGGCTGAAACTATGGAGGATTTATATGAGTGGAAGACTGCACTTGAGAATGCTTTAGCATTGGCACCCAGTGCTACTAATGGAACGGAGCAAAATGGTATCTCCAGGAACGATCAGAATGATTCAATTGATATTTCTTTGGACCAGTTGAAAGATAGAGAACCAGCTAAATCTACTGTTATTGGTCGACCAATTTTACTTGCTTTGGAGGATGTTGATGGAACACCATCATTTTTGGAGAAAGCCCTAACATTCATAGAAGAGCATGGAGCAAATGTGGAAGGAATCTTGCGACAAGCAGCTGATGTTGATGAGGTTGAACGTCGAGTTCGGGAATATGAACAAGGAAAAGTTGAGTTTTCTCCAGATGAGGATGCACATGTTATTGGAGACTGTATTAAGCATGTACTACGCGAATTGCCATCTTCTCCAGTCCCCGCATCTTGTTGCAAGGCACTGTTAGAATCTTGTCGATCTGAGCGTGGTAGTAGGGTTGCTACTATGCGTGAAGCAATAAATGACACTTTCCCCGAACCAAATCGCCGCTTATTGCAAAGAATACTCATGATGATGCAAATTGTGGCTTCACGCAAAGCTGTGAATAGAATGAGCTCCTCAGCTGTGGCAGCTTGCATGGCGCCTTTACTTCTTCGGCCCCTTTTGGCCGGAGAATGTGAAATTGAAAATGATTTTGATGTAGGTGGTGATGGTTCTATTCAACTTTTACAAGCTGCTGCTGCGGCAAACCATGCTCAAGCAATTTGTATAACCTTATTAGAGGAATATAGCAGCATATTTGGGGAAGGTTCCATGTCCCCGGACATATACACTGATTCAGATGAAGAGAGTGGATCTGAGAGTGAGGAGGCAACTGATGATGATTTGTCCTATGATGATGATGATGAAGAATATGATGAAGAAGAATATGATGACGAATCAGTACATGATAGTGATGGAGATGGTGATCTTGGTAGTGAATCGTACAGTGGAACTGAAGATTCAGAGGCCGATGATGCCCATGATGAGGAGCATGACCGTGCTAGTTCAAGTTCGAAATCCTCAGTTTTGACTGAAAAATCTAAAGCCACTCGAAAGTTATCATCAAAGTCACTAGAAGGCTCACTGGCTCAACAAAAAGATATCAAAAGCTCTGAATATCTCACGAGTCCAAAGAAGACTGACTACGGTGATCAGTCCAATAAGCCTGCTTGTAAAGTTAAAGATGTTATTGATGAAGCTACATTACATAATTTAAATTCTCCTAGCCCTGCTTCACATATCCAAAAATCTAATACCATGTCCAATGGCCCAGCACCTCGTCATCGCAACACATTGGGGCGCACCTCAGCAAGGAAGAATCTCTCCATGGAATCCATTGATTTTCCTATTGAAGAGGAGGAGGAAATTGAAAGGCTTGAAGCTGCCAGGTCAGAATTACAAACTCAAATTGCAGAGCAGGTGAAGGCAAATGAAGAGCTGCAATCTCAAGTGGAGAATCAAAAGAAAGCCTTGGACGAGCGTCGTCTTTCTCTTGAGCAAGATGTTGCTAGACTACAGGAACAGTTGAACAAGGAAAAGAATTTTCGGGCAGCTCTTGAGAACAAAGCAGAGCTTGAAGCATTAGCTCTGGTAGAAGCAGATCTTGCCAATTTAGAGTCGAAGGTTGAGGAACTTGGGGCGAGGCTTAATGCACAAGTTAAGCGGAATATTGGAACTACTCCGGATTTCTCTAATCAACCACGACAGATGTCAAATCAGGAAAGAAGATTAAAATACAAGGCAGATGCTGAAGCTGCTGCCTCAACACAATCTGATAGATCAATAAGTAAGGGTACGGTAATGACCCAACAGGAGACTCATACAGTCGGAGCAGAAAGTGATACTGAGAGAAAGCCAGAGTCAACACCTTTACCAAACAAACACCCACCAAGTAGCTCCAAGCGATCTAGTTCAAAGGGCGAGGGAGCAAATTCCTCTCCTTCTGCACTCACAAAACTGACATCCAGACTGAACCTTTTGAAGGTGGCCCGAAATCAGATTGCAAATGAACTCCAAAACTTGGAAAAAGGGCGAGACTCAAGTCGCTCGTCGCAGAACGTGGAAAAAGGAAAAGGATCTGAGCGTCATCAATCAATGCCATCCCCAAAAACATATGGAGGGTCTGAAACTCACTCCGTGCCAAACCCTGAAAAAGGTAAGGGGTCAGAATCATCTGACAAAGGATCAAGCAAAGGAAAATCATCTTATCAGAGTTCATCAGACAAACTGAAAAAATCGGACAGTCATCCGGCCCACCACACCGATGGATGGAATAAACAACCAAAACACTTGGAAAGAGGAAGGTCAGAAGGCCATCAGACTTATAATGTGGAGAAAGGCCGGTGA 2757 0.4266 MTSTNAELSQGNGSASFCSINSQSGSQEHPQSGTGNMIFKSGPLFISSKGIGWTSWKKRWFILTQTSLVFFRSDPNAIPQKGNEVNLTLGGIDLNNSGSVVIKADKKLLTVQFPDVHDGRAFTLKAETMEDLYEWKTALENALALAPSATNGTEQNGISRNDQNDSIDISLDQLKDREPAKSTVIGRPILLALEDVDGTPSFLEKALTFIEEHGANVEGILRQAADVDEVERRVREYEQGKVEFSPDEDAHVIGDCIKHVLRELPSSPVPASCCKALLESCRSERGSRVATMREAINDTFPEPNRRLLQRILMMMQIVASRKAVNRMSSSAVAACMAPLLLRPLLAGECEIENDFDVGGDGSIQLLQAAAAANHAQAICITLLEEYSSIFGEGSMSPDIYTDSDEESGSESEEATDDDLSYDDDDEEYDEEEYDDESVHDSDGDGDLGSESYSGTEDSEADDAHDEEHDRASSSSKSSVLTEKSKATRKLSSKSLEGSLAQQKDIKSSEYLTSPKKTDYGDQSNKPACKVKDVIDEATLHNLNSPSPASHIQKSNTMSNGPAPRHRNTLGRTSARKNLSMESIDFPIEEEEEIERLEAARSELQTQIAEQVKANEELQSQVENQKKALDERRLSLEQDVARLQEQLNKEKNFRAALENKAELEALALVEADLANLESKVEELGARLNAQVKRNIGTTPDFSNQPRQMSNQERRLKYKADAEAAASTQSDRSISKGTVMTQQETHTVGAESDTERKPESTPLPNKHPPSSSKRSSSKGEGANSSPSALTKLTSRLNLLKVARNQIANELQNLEKGRDSSRSSQNVEKGKGSERHQSMPSPKTYGGSETHSVPNPEKGKGSESSDKGSSKGKSSYQSSSDKLKKSDSHPAHHTDGWNKQPKHLERGRSEGHQTYNVEKGR 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01036 918 Gene3D - 25 145 IPR011993 -
Phco7g01036 918 SMART RhoGAP_3 197 387 IPR000198 GO:0007165
Phco7g01036 918 MobiDBLite consensus disorder prediction 394 586 - -
Phco7g01036 918 MobiDBLite consensus disorder prediction 403 441 - -
Phco7g01036 918 MobiDBLite consensus disorder prediction 694 789 - -
Phco7g01036 918 MobiDBLite consensus disorder prediction 764 789 - -
Phco7g01036 918 MobiDBLite consensus disorder prediction 491 520 - -
Phco7g01036 918 SUPERFAMILY PH domain-like 10 144 - -
Phco7g01036 918 SMART PH_update 38 146 IPR001849 -
Phco7g01036 918 MobiDBLite consensus disorder prediction 694 709 - -
Phco7g01036 918 ProSiteProfiles PH domain profile. 37 144 IPR001849 -
Phco7g01036 918 MobiDBLite consensus disorder prediction 808 918 - -
Phco7g01036 918 CDD PH 40 139 - -
Phco7g01036 918 ProSiteProfiles Rho GTPase-activating proteins domain profile. 191 390 IPR000198 GO:0007165
Phco7g01036 918 Pfam RhoGAP domain 200 343 IPR000198 GO:0007165
Phco7g01036 918 MobiDBLite consensus disorder prediction 539 579 - -
Phco7g01036 918 MobiDBLite consensus disorder prediction 834 856 - -
Phco7g01036 918 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 10 823 - -
Phco7g01036 918 Pfam PH domain 40 143 IPR001849 -
Phco7g01036 918 MobiDBLite consensus disorder prediction 875 918 - -
Phco7g01036 918 MobiDBLite consensus disorder prediction 724 746 - -
Phco7g01036 918 Coils Coil 589 692 - -
Phco7g01036 918 MobiDBLite consensus disorder prediction 812 833 - -
Phco7g01036 918 CDD RhoGAP 200 338 - -
Phco7g01036 918 SUPERFAMILY GTPase activation domain, GAP 199 392 IPR008936 -
Phco7g01036 918 Coils Coil 794 814 - -
Phco7g01036 918 Gene3D Rho GTPase activation protein 168 391 IPR008936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01036 Phco-Chr7 8516952 8527902 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01036 7 8516952 8527902 Phco7g01036 7 8516952 8527902 ECH