Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01033 ATGGATGCTAAGTTCAGCATTGCCTTGTTTCTGTGTGGAGTTTGGGTGATGAGTGGAAATGCCACTGACCCTTGTGCCTCTCAACCGGATGAGTCCGACCTCAACGTCATTCCCATCTACAGCAAATGCTCACCGTTCAAGCCACCCAAGGCAGACTCCTGGGATACCAGGATTGTAACCATGGCCTCAGAAGACCCACTCCGGGTCATGTACCTGTCAACCTTGTTGGCTAAGAAGACCGTCTCCTCCGCCCCAATCGCTTCGGGCCAAGCCTTCAACATTGGTAACTACGTGGTCAGGGTCAAACTGGGAACCCCCGGTCAACTTTTGTTCATGGTTTTGGACACCAGCACTGACGAGGCCTTTGTTCCATGCTCCGGCTGCACGGGCTGCTCTACCACCACGTTCTCCCCCAAAGCCTCCACCAGCTACAGCCCATTGGACTGCTCCGTACCCCAGTGCGGTCAGGTCCGTGGCCTTTCCTGCCCCGCCACAGGAACCGGCGCCTGCTCCTTCAACCAGTCCTATGCTGGCTCCTCTTTCTCCGCCACGCTCGTCCAAGACTCCTTCAGATTAGGAGCTGATATTATCCCTAATTACTCCTTCGGCTGCGTCAACGCCATCACCGGGGCCTCAGTTCCGGCCCAAGGGCTTTTGGGTCTGGGCCGTGGCCCACTGTCGCTTCTCTCCCAGTCCGGGACAAACTACTCCGGTGTATTCTCTTACTGCCTCCCAAGCTTCAAATCGTACTACTTCTCCGGGTCGCTCAAACTCGGGCCTGTGGGCCAGCCCAAGAGCATCCGGACCACCCCGCTTCTGCGTAACCCCCACCGGCCTTCTCTTTACTACGTGAACTTCACCGGAATCAGCGTGGGACGCGTCCTCGTGCCTTTCCCCAGCGAGTATCTTGAGTTCAACCCATATAACGGATCCGGAACCATAATTGATTCGGGCACCGTGATAACCCGGTTTGTGGAGCCCGTGTACAACGCGGTGAGGGAGGAGTTCAGGAAGCAGGTGGGAGGCACGTTCTCGAGCATCGGAGCTTTCGACACATGTTTTGTGAAGACGTACGAAACACTGGCACCGCCAATTACCCTTCACTTCGAGGAATTGGACCTGAAGCTGCCATTGGAGAACAGCTTGATTCACAGCAGTGCCGGGTCACTGGCTTGTCTTGCGATGGCAGCGGCGCCGGATAATGTGAACTCGGTTTTGAACGTGATTGCGAACTTTCAGCAACAGAATCTGAGGATTTTGTTTGATACCGTGAATAATAAGGTTGGCATAGCCCGTGAGGTTTGTAACTAA 1311 0.5515 MDAKFSIALFLCGVWVMSGNATDPCASQPDESDLNVIPIYSKCSPFKPPKADSWDTRIVTMASEDPLRVMYLSTLLAKKTVSSAPIASGQAFNIGNYVVRVKLGTPGQLLFMVLDTSTDEAFVPCSGCTGCSTTTFSPKASTSYSPLDCSVPQCGQVRGLSCPATGTGACSFNQSYAGSSFSATLVQDSFRLGADIIPNYSFGCVNAITGASVPAQGLLGLGRGPLSLLSQSGTNYSGVFSYCLPSFKSYYFSGSLKLGPVGQPKSIRTTPLLRNPHRPSLYYVNFTGISVGRVLVPFPSEYLEFNPYNGSGTIIDSGTVITRFVEPVYNAVREEFRKQVGGTFSSIGAFDTCFVKTYETLAPPITLHFEELDLKLPLENSLIHSSAGSLACLAMAAAPDNVNSVLNVIANFQQQNLRILFDTVNNKVGIAREVCN 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01033 436 Gene3D Acid Proteases 75 259 IPR021109 -
Phco7g01033 436 FunFam aspartyl protease AED3 76 259 - -
Phco7g01033 436 SUPERFAMILY Acid proteases 90 435 IPR021109 -
Phco7g01033 436 Gene3D Acid Proteases 260 436 IPR021109 -
Phco7g01033 436 Pfam Xylanase inhibitor C-terminal 282 431 IPR032799 -
Phco7g01033 436 Pfam Xylanase inhibitor N-terminal 97 259 IPR032861 -
Phco7g01033 436 FunFam Aspartyl protease AED3 260 436 - -
Phco7g01033 436 ProSiteProfiles Peptidase family A1 domain profile. 97 431 IPR033121 -
Phco7g01033 436 PANTHER ASPARTYL PROTEASES 25 429 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01033 Phco-Chr7 8501002 8502312 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01033 7 8501002 8502312 Phco7g01033 7 8501002 8502312 ECH