Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01032 ATGCGTGTCACCGGGGATCTAGGGTTTTCGAGCCTGATCCTTCTGGTGCTTTGTCTAGTGCTGCCGGTGATCGGCCTCGTAATTAGCCGTAGATGGCAGGTTTCGGAGGCTAAGAAGGGGGAGATCAGGAGACTTTTGGTTTTGGCGGCGGAGGAAACTGCCAGGGCCGAGAAAGAAGCATCCTTTGCGTACAACACGGCGGTTTCTGCCGCTCCAAGTAATCAATGTGCCGTGTGCTATTTTCCCGCCACTGCGCGCTGCGCTCAGTGCAAATCGGTTCGCTACTGTTCCTTTGAGTGCCAAACTGTTCATTGGCGGCAAGGTCACAAGTTAGAATGCGGTCCTACCAGCACAATCCATCGAAGTTATGATGTAACAAGTGATCTTGGCAGCAAGGTGGTAGAACAAGGCTACTCTGGAATCTACGGTGAGAAGTCAGAATGTGAAAGCACAGAATGTAAATCATCCTTTGAAAAGCCTCCAATTTCTGATATCTGTTTTTCTCCAGGAGTTTTATCTGGGAATGATGAGAATATCAGATTTGAGTCCCATGCAGAAGGAAATATAACAGATTCTAATTCAGACTTGTCCAGTAACTCTTTTTCTGGATTCTCAGCTTCCACGGGTGCCAGTGATTCATCCGATGATTCCTCTGTCTGTGAGAGTATCATTTCAAATGAGCATGACAGATCAGAGGGACATATTTTTGTTGATTCCACCCTTGACATTCCTGACAACACTAATGACAATAGCGCGGGTGTAACCATGTCTTCTTCACCGAAGTTTGCTACTTTGGTTGATTCAATAGATGGTTTTTCTACAATGCATAAATTAAATCATATTGGACCTGGTTTTAGTAAAGACGAGAGTAAGTTTGCATCAAATGGCAATTCAGGTTCAAGTGTGTATAAGGGGAACACAATTGACCCTTCTACAGTGTTTTCTGGATTCTGGGATAAAGCACTTGATGGGATTAAAGATGATTCTAAGAATGACACTCATCCATCCTCTTCTGATAAATCAGCGGGTAAAAGGACTGTTTCTGAATCTTCATTTCACTTTTCATTGAGTGCCATTCCTCCTTCACATGTACGAGATACCAAGATGAAGGGTTCTGTATCTGATAATGCTTTTCCAAATTGTATTGGGTCTGAGAATGACAACATGAATTCTTCAAAGGGGAGGAATTTCTCGTTCCCCAACAGCAAAGTTTCCAATATTAGGAGTTATGTTACTCCAAGTGGTTCTGAATCTGATCATTTGGAATCTAAAGACAGCTCCAGGCCACCTTTATCATCTTTCTCCCTTCAATCCTCCAGTGTTGGCAAAGATTCAGTTTGTGCTGATGCTTTGAGCATCCATAACTTGCAATCGACTGGCACTGAGGTATCAAATCATGTTGTGGAAAACAATTGCAGCACCTTGAAGTCTACTGAGATTAGTTGCCTGAAGCTTGACCATGCTGATTCTAATTTAGCTTCTGAAACTAAAGAGCATTCTCATACTAGTACAAAACATGGGAATAATGATGTTGAATTTGGAACTCGTGCTGTCACTTCCTCTCGTGTTGCTAGCTGTTCTGCAAATTCTAAAAGTGGCATAAAAACTTCTGTTTTGAAAGTTGTTGATCAGTTTAGAGGATCAAATATGTCCAAGCACTTTCCATTATCTGTTGGTAGTGATATTGGTGAAAGACACAATGACAAGGTTTTTTTCCCTTATGAATTGTTTGTCAAGCTTTATAACTCGAACAAGGTGGAGTTATGCCCATTTGGACTTATAAATTGCGGAAACAGTTGTTATGCTAATGCTGTACTTCAATGCTTAGCATTTACACCGCCTCTGACTGCTTATTTGCTTCAAGGATTACATTCTAAATCATGTGCAAATAAGAAATGGTGTTTCACCTGCGAATTTGAAAGATTGATTTTGAAGTCAAAGGATACAAAATCTTCAGTATCTCCTAAGAGCATAATCTCTCATTTACAGAATATTGGGAGTCAGCTTACTAATGGGAGAGAAGAAGATGCACATGAATTTCTTAGGCATGTTATTGACACAATGCAATCTGTTTGCCTTATGGAAGCTGGGGTTAATGCATCGGGCTCCTTAGTAGAGGACACTTCTTTAATGGGTCTAACATTTGGAGGTTACCTTCGATCAAAGATAAAATGCATGAAATGTGGAGGGAAGTCTGAGCGTCAAGAAAGGATGATGGATCTGACTGTTGAGATAGAAGGGGAAATAACAACCCTGTTGGAGGCCCTTCAACGGTTTACAAGCACTGAGACTCTGGATGGGGAAAACAAGTACCACTGTGTCAGATGTAAATCTTATGAGAAGGCCAAGAAGAAGCTGACAGTTTCAGAGGCACCCAATGTTCTTACTGTTGCATTAAAGAGATTTCAGTATGGGAAATTTGGGAAGCTCAACAAGCCTATTAAATTTCCTGAAATACTTAACTTGGCTCCTTTCATGAGTGGGACTAGTGATAAATCACCCGTATACAGATTGTATGGGGTAGTTGTTCACCTAGATACCATGAATGCTGCCTTTTCGGGTCATTATGTGTGCTATGTGAAGAATATCCAGAACAGGTGGTTCGAGGTTGATGACAGTGTGCCAGCTGTTGCGGATGCCGTAGAGTGCTATGAGGCAGAGGCTATTCCAAAAATGCCCTATGAACTGCGACATCCCCTTGTTTCTCTTGTCTCTTCTCAAACCTCTCTCTGCCTCTCCTATGTTGATGTTGATGTTGCCTCTGTCTTCTCTGGCAACTGTGTCTGCCACCTCATTGCCACAATTAAACTGAAAGAATTCATGCAAAGGTACACAAATGACAAAGATGGTGCAAGAGGTTCAGCAGGATTGGAAGCTCTGCAAGCCAGTTTCCTTCCAAAATCATTTTGTTCTGGGATGAAAGTGACGGCTGTTGAATTGGAGAGAGTCTTGACAAAAGGAGCATATATGCTTTTATATGCAAGGTGCTCGCCAAGGGCTCCAAGATTAATTAGGAACAGAATGCTATCCTCGGATTCAAAAAGTAAAGTTAGCAGAAAGACTCTTGCAACGAAAGCAAGATATATATCTACGAATTTTGGTGTTGCTGAAAATGTCGATAGTTCCATCTCTCCAGATGGTTCACCTGCCTTGGAGTCTTTCTATTCAAAGTTTCATCACCTGAAAAAGATTTTAGAGGAAGACTCGTCGAGTGATAGTTCATCCCTCATTAGCAGCAATTCTGATGAAGGTTCTTGCAGTACAGATAGTACCTGTGATTCAGCCAGTACAGATGACTTCACTGATTATCTATTTGGTGATTCGGGAAATGGGTGGAGCAGTGTGTGGAAGAGTTCTGATTCTGACTCATCCTGGTCATCCTCATCTTCCCCCTTAAACTCTCGACATTCCCCCCTCTCTGATATGGACCGATACGATTCTTGTTTGCATTTTAACACAACTTCACAGCATAGAGGGTTAGATAGTTGTAGGATTAGTAGCAAGATTAGTAGTAGAGAGAGTGACTCTTTTGTGAAAGTAGGATCTAACCTTTGGAATGATACAGAGTGTGGTGTATTATGTACAAAGTATAGAAGGAATTAA 3603 0.4166 MRVTGDLGFSSLILLVLCLVLPVIGLVISRRWQVSEAKKGEIRRLLVLAAEETARAEKEASFAYNTAVSAAPSNQCAVCYFPATARCAQCKSVRYCSFECQTVHWRQGHKLECGPTSTIHRSYDVTSDLGSKVVEQGYSGIYGEKSECESTECKSSFEKPPISDICFSPGVLSGNDENIRFESHAEGNITDSNSDLSSNSFSGFSASTGASDSSDDSSVCESIISNEHDRSEGHIFVDSTLDIPDNTNDNSAGVTMSSSPKFATLVDSIDGFSTMHKLNHIGPGFSKDESKFASNGNSGSSVYKGNTIDPSTVFSGFWDKALDGIKDDSKNDTHPSSSDKSAGKRTVSESSFHFSLSAIPPSHVRDTKMKGSVSDNAFPNCIGSENDNMNSSKGRNFSFPNSKVSNIRSYVTPSGSESDHLESKDSSRPPLSSFSLQSSSVGKDSVCADALSIHNLQSTGTEVSNHVVENNCSTLKSTEISCLKLDHADSNLASETKEHSHTSTKHGNNDVEFGTRAVTSSRVASCSANSKSGIKTSVLKVVDQFRGSNMSKHFPLSVGSDIGERHNDKVFFPYELFVKLYNSNKVELCPFGLINCGNSCYANAVLQCLAFTPPLTAYLLQGLHSKSCANKKWCFTCEFERLILKSKDTKSSVSPKSIISHLQNIGSQLTNGREEDAHEFLRHVIDTMQSVCLMEAGVNASGSLVEDTSLMGLTFGGYLRSKIKCMKCGGKSERQERMMDLTVEIEGEITTLLEALQRFTSTETLDGENKYHCVRCKSYEKAKKKLTVSEAPNVLTVALKRFQYGKFGKLNKPIKFPEILNLAPFMSGTSDKSPVYRLYGVVVHLDTMNAAFSGHYVCYVKNIQNRWFEVDDSVPAVADAVECYEAEAIPKMPYELRHPLVSLVSSQTSLCLSYVDVDVASVFSGNCVCHLIATIKLKEFMQRYTNDKDGARGSAGLEALQASFLPKSFCSGMKVTAVELERVLTKGAYMLLYARCSPRAPRLIRNRMLSSDSKSKVSRKTLATKARYISTNFGVAENVDSSISPDGSPALESFYSKFHHLKKILEEDSSSDSSSLISSNSDEGSCSTDSTCDSASTDDFTDYLFGDSGNGWSSVWKSSDSDSSWSSSSSPLNSRHSPLSDMDRYDSCLHFNTTSQHRGLDSCRISSKISSRESDSFVKVGSNLWNDTECGVLCTKYRRN 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01032 1200 FunFam Ubiquitin carboxyl-terminal hydrolase 15 67 117 - -
Phco7g01032 1200 Gene3D - 63 118 - -
Phco7g01032 1200 MobiDBLite consensus disorder prediction 286 305 - -
Phco7g01032 1200 MobiDBLite consensus disorder prediction 373 417 - -
Phco7g01032 1200 ProSiteProfiles Zinc finger MYND-type profile. 76 113 IPR002893 -
Phco7g01032 1200 MobiDBLite consensus disorder prediction 326 346 - -
Phco7g01032 1200 MobiDBLite consensus disorder prediction 363 438 - -
Phco7g01032 1200 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 592 607 IPR018200 GO:0004843|GO:0006511
Phco7g01032 1200 Pfam Ubiquitin carboxyl-terminal hydrolase 591 873 IPR001394 GO:0004843|GO:0016579
Phco7g01032 1200 Gene3D Cysteine proteinases 579 895 - -
Phco7g01032 1200 SUPERFAMILY Cysteine proteinases 587 918 IPR038765 -
Phco7g01032 1200 ProSitePatterns Zinc finger MYND-type signature. 76 113 IPR002893 -
Phco7g01032 1200 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 591 901 IPR028889 -
Phco7g01032 1200 SUPERFAMILY HIT/MYND zinc finger-like 73 116 - -
Phco7g01032 1200 MobiDBLite consensus disorder prediction 1071 1091 - -
Phco7g01032 1200 MobiDBLite consensus disorder prediction 290 305 - -
Phco7g01032 1200 Pfam MYND finger 76 113 IPR002893 -
Phco7g01032 1200 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 393 999 - -
Phco7g01032 1200 FunFam Ubiquitin carboxyl-terminal hydrolase 15 585 889 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01032 Phco-Chr7 8482481 8490543 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01032 7 8482481 8490543 Phco7g01032 7 8482481 8490543 ECH