Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01010 ATGGAAAGTGTGTGCCTCAAGACCTTAGAATTAAAAGAACGCAACTACATGGGGTTATCTGATTGTTCTTCTGTGGACAGCTCAGTTCCGTCCTTCTCAGAAGAGACTAAAAGTAATCTGAACCTGAAAGCCACTGAGCTCACGCTTGGGCTTCCGGGATCACAGTCCTCTCAAAGAGATTCCAATCTTTGCTTAAGAAGCTCAACTCAATTTGATGAAAAACCCTTCTTTCCTTTGGGTCCTCTGGCTGATGATCACCATTCTTCAACCAAGACTGCTGTTTTGGGAAACAAGAGAGGATTTTCAGATGCCATGAATGGCTTCTCAGAGGGGAAGTTCTTAGTTGATTCGGAGGCCAATCCGATACTTTCTCCCAGGCCCGCTTCGAACTTGGGACTAAATCCTGGTTCTACACTTGAGAAGGCTGGGGCTCTGCAAAACAAAATGAAAGAAGCAGCAACAACAAAGATGGGGCTCGATAGGCCTCATTCTGCCAATGAAACTAGACCAAGTATTGATTGTTCTGCTAATAATAACAACAGTGCACCAGCTACCAAGGCTCAGGTTGTGGGGTGGCCTCCTATAAGATCATTCAGGAAGAATTCATTGGCAACTAATTCAAAGAACAATGAAGAGGTTGATGGAAAAGTAGGGGTTGGTGCACTGTTCGTCAAAGTCAGCATGGATGGGGCTCCCTATTTAAGGAAAGTAGACTTGAATAATTACTCTACATATCCAGAATTATCTTCTGCTCTAGAGAAGATGTTCAGCTGTTTTACTATAAGTCAATGTGGATCTCATGGAATTCTGGGCAGGGAAATGCTGAATGAAACCAAGCTGAAGGACCTTCTTCATGGATCAGAATATGTTCTTACATATGAGGACAAAGATGGCGATTGGATGCTTGTGGGTGATGTTCCCTGGGAGATGTTTATTGAAACATGCAAGAGGCTGAGGATCATGAAGAGTTCTGATGCCATTGGTCTAGCTCCCAGGGCTGTTGAAAAAAGTAAGAGCAGGACCTAG 1026 0.4386 MESVCLKTLELKERNYMGLSDCSSVDSSVPSFSEETKSNLNLKATELTLGLPGSQSSQRDSNLCLRSSTQFDEKPFFPLGPLADDHHSSTKTAVLGNKRGFSDAMNGFSEGKFLVDSEANPILSPRPASNLGLNPGSTLEKAGALQNKMKEAATTKMGLDRPHSANETRPSIDCSANNNNSAPATKAQVVGWPPIRSFRKNSLATNSKNNEEVDGKVGVGALFVKVSMDGAPYLRKVDLNNYSTYPELSSALEKMFSCFTISQCGSHGILGREMLNETKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIETCKRLRIMKSSDAIGLAPRAVEKSKSRT 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01010 341 ProSiteProfiles PB1 domain profile. 221 323 IPR000270 GO:0005515
Phco7g01010 341 Pfam AUX/IAA family 45 332 IPR033389 -
Phco7g01010 341 SUPERFAMILY CAD & PB1 domains 220 322 - -
Phco7g01010 341 Gene3D - 216 335 - -
Phco7g01010 341 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 40 328 IPR003311 GO:0005634|GO:0006355
Phco7g01010 341 FunFam Auxin-responsive protein 216 333 - -
Phco7g01010 341 MobiDBLite consensus disorder prediction 155 187 - -
Phco7g01010 341 MobiDBLite consensus disorder prediction 168 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01010 Phco-Chr7 8272850 8276435 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Phco7g01010 AUX_IAA 4.3e-91 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01010 7 8272850 8276435 Phco7g01010 7 8272850 8276435 ECH