Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01001 ATGGCCGCTCCTACCAGGGACCAAGCCCTCTCTCTTCTCGCTGCTGCTAACAACCACGGCGACCTCACCGTTAAAACCTCATCCCTCAAACAAGCAAAGGACCTTCTTCTCTCCATCGACCACTCTCTCGCCGCGGACCTGTTCCCTTACTTGCTTGAGCTTCAGTCTTCTCCCGAAAGCCTCGTTCGCAAATTGCTCATTCAGATAATCGAGGAGATTGGTTTTAAAGCAGTTGAACACTCTCCTACGCTGATATCTGTGCTATTAACATTTTTACGAGACAGTGATGTAACTGTTGTAAAGCAGTCTATTGTTAGTGGCACAAATATCTTTGGTAGTGTTTTTGAGGAGTTGATTGTGCAGTTTCAACAAAATGGTAAAGTTGAGAGGTGGCTAGAAGATACTTGGATGTCAATGCTTAAGTTCAAGGATGCTGTTTTTGGGATTGCTCTGGAGCCTGGTTCTGTCGGAATAAAGTTGCTAGCACTGAAATTCCTTGAAATGTTTGTATTTCTATTTACATCTGACGTCAGTGATTCTGAGAAATTAGCCACAAAAGGAGTTAGACAAGCTGTTAATGTCTTGTGGTTGGTTGGTGGTCATCCTCACCCTGTTCTTGATCCAGTGGTGCTCATGTCAGAAGCAAATAGGACTCTTGGCATTCTATTAAATTTATTGCAGTCTGTTGGCAGTCCTCCTGGTTGCTTGACTATTACTGTTGTAAATTGTTTAGCAGCCATTGCAAGAAAAAGGCCACAACACTATGATACTATTCTTTTAGCACTGCTTGAATTTGATCCAAATGCTTTAACAGCTAAGGGATGTCATGTTGCTAGTATTCAGTACTCCTTAAGAACAGCTTTTTTGGGATTTCTTAGGTGCACTTATTCACCAATACTAGAGTCAAGAGAAAGACTAATAAGGAGCCTGCGAGGTATGAATGCGGGGGATGCTGCAGATCAAGTGATTCGACAAGTCGACAAAATAATTAAAAATGGTGATCGTTCTACTCGTGATGCACGAATTAGCAAGGATGATCAACCATCAACTCAGTCATCTGTTTCAGGGGAATTATCTAGAAAAAGACCTGTTCCTCTAGATAATGAACAAATGACCAATGGTCACGAAACCATCTCTAAACGGATTCGTTCTGGTCCTGACTCTCACTCTACTTTACCAGCTAAAATAAATGATTCTGGGCAAGATCCTAACTCTGCTAATGGAGTATCACCTAATGCTCCTTTGCTGGATAGCGAAATGACTGCTGTAGAGCAAATGATTGCTGTGATTGGTGCTTTACTTGCTGAAGGAGAGAGAGGTGCTGAATCTCTTGAAATCCTGATTTCAAAGATTCATCCTGATCTATTGGCTGATATTGTCATAACTAATATGAAGCACTTGCCTAAGACTCCCCCACCACTAGCGAGGATTGGGAATTTACCAGTAACACGACAACTAAGCTCCCAAGTCAGTCAGTCACAGGTTATAGCAACTTCTGTTCCAACAAATGCTGTCCAATCCTTGTCTGGTACTGGCCAAGCTTTGTTGCCTTCAACTACGGCTGCTGTTATTGGCGCTAGTTCATTGCCGTCTGACACGTCTAACTTCAGTAACCTGCCTGCTGATTCTAAACGTGATCCACGGAGGGATCCTCGTCGCCTTGATCCCCGGCGTGTTGTTGTAGCTCCTGGAGGAGCAACTGTATCAATTACAGATGATACTGGGGCCACAAAATTAGAGTTTGATGAACCAGTTTCCTCCATTAAGCCTGTTTCACTTCATGTCGTTACTGCTGATGACAATACTCCATCAGATTTAACAGTCAAACTAAAAAATGATGATATGATCTCTGAAGGTGCCTCAGTTTCAGGACCTGATCAGGTAATCCCTAAAACAGAGGTTCAGGAAAGGCCTGGAGATATTCATCGGATTGCAGAAGCAGATACTTCCTTCGGTCCCTCAGTCTCATCAAGAGAGGAGGATCTGAGTACGGTGAATCTGTCAGATGACATTGAAACAATTGGTACAGATTCATCATCTATTTCAGAGTTTGATCAGTTTTCTCTTGATGTTCAAGTTGAATCCACATTGGAAGATACTTGTCTGGAGTTACCACAGCTTCCACCTTATGTTGAACTATCCAAAGAACAGCTTAGTATGGTGAAAAACATGGCTGTTAGGCATATAATCAATTCTTACAAACATTTACATGGGACATATTGTCAGCAGTTTTGGATGCCACTACTTGCTCGACTAGTTGCTCAGATTGATGATGACGATGAGTTTATTATGATGCTGCAAAAACACATCTTGGAAGACCACTGGCTAAAGGGACATGAACTCGTACTGCATGTTTTGTACCATCTGCACTCCCTTATGATATTGGATTCAGTTGAAAATGCTTCATCTTCTGCTGTTTTATATGAAAAATTTCTCTTGGGAGTGGCCAAAACTTTGTTAGACTCTTTTCCAGCTTCAGACAAGTCTTTTAGTAGACTTCTTGGTGAAGTTCCACTTTTGCCTGAATCGTCCTTGAAGATTTTGAATGATCTCTGCTATTCTGATGTTATTGGTCATGATGGAAAAGTTATCCGTGACATTGAACGTGTGACTCAAGGCCTTGGTGCTATCTGGAGTTTAATTTTGGGGCGTCCACAAAATCGCCAAGCCTGCTTGGGAATAGCATTGAAGTGTGCTCTCCACCCACAGGATGAGATTCGAGCTAAAGCTATTCGGCTGGTTACAAACAAGCTCTTTCAGCTTAGTTACATATCAGGAGATGTTGAAAAATTTGCAACAAAGATGCTGCTTTCTGCTGTAGAACATGATGTTTCAGATACAGGTCTTTTGCAATCTGGACCTGGAGCTACTGAACATAGAGGCGAGGCAGAGGTTGAAGGCCATGAAATAAGTACTTCCCAGGTTTCAGAGTCTACAATTTCTGAAGATGACTCTACTAGGGTGGCTAAACCATTGATTCAAAATGTTCCATCTATATCATTTTCTGAAGCTCAACGCCTCATTTCTCTGTTTTTTGCTTTGTGTATAAAGAAACCCAGTCTTCTTCAGATTGTATTTAATGTATATGGGCAAGCCCCAAAAACTGTTAAACAGGCTTTTCACCGCCACATTCCTATTGTTGTGAGGGCACTGGGGCAATCTTATTCTGAATTGCTCCGCATCATATCTGATCCACCTCAAGGAAGTGAAAATCTTCTGACACTGGTACTGCAAATATTGACTCAGGACACTACACCATCTTCTGATTTAATATCTACTGTTAAACGTTTATATGAAACAAAATTTAGGGATGTTACAATTCTTGTTCCATTATTGTCTTCGCTTTCCAAACAGGAGGTTTTACCAATATTCCCAAGGCTTGTTGATCTTCCATTGGAAAAGTTTCAAAGAGCACTTGCTCACATACTACAGGGTTCAGCTCATACAGGTCCAGCTTTAACTCCTGTAGAAGTGTTGGTTGCAATGCATGGAATTGTTCCAGAGAAGGATGGCCTTGCACTTAAGAAGATAACAGATGCTTGCTCGGCTTGTTTTGAGCAACGTACTGTGTTCACACAACAGGTTCTGGCGAAGGCGTTGAACCAGATGGTTGATCAAACTCCGCTGCCTCTACTTTTCATGAGAACAGTTATTCAGGCAATTGATGCTTTTCCTGCACTGGTTGATTTTGTTATGGAGATACTCTCAAAACTTGTGACAAGACAGGTGTGGCGTATGCCTAAACTTTGGGTTGGTTTCTTAAAATGTGTATATCAGACACAGCCACGTTCTTTTCATGTGCTATTGCAGTTGCCACCTCAACAACTTGAAAGTGCGCTAAACAGGCATTCTAATCTCAGAGGTCCCCTTGCTTCATATGCCAGTCAACCAACTATAAGATCAACACTTAGTAGATCAATTTTAGCAGTTCTTGGTCTTGCAAATGAAACTCATGTGCAGCAACATTTGTCAACTTCCTTACACTCCTCTGACACAAGTTCTTCAGTTCATGGGGCAACTCTTACGTGA 4029 0.4182 MAAPTRDQALSLLAAANNHGDLTVKTSSLKQAKDLLLSIDHSLAADLFPYLLELQSSPESLVRKLLIQIIEEIGFKAVEHSPTLISVLLTFLRDSDVTVVKQSIVSGTNIFGSVFEELIVQFQQNGKVERWLEDTWMSMLKFKDAVFGIALEPGSVGIKLLALKFLEMFVFLFTSDVSDSEKLATKGVRQAVNVLWLVGGHPHPVLDPVVLMSEANRTLGILLNLLQSVGSPPGCLTITVVNCLAAIARKRPQHYDTILLALLEFDPNALTAKGCHVASIQYSLRTAFLGFLRCTYSPILESRERLIRSLRGMNAGDAADQVIRQVDKIIKNGDRSTRDARISKDDQPSTQSSVSGELSRKRPVPLDNEQMTNGHETISKRIRSGPDSHSTLPAKINDSGQDPNSANGVSPNAPLLDSEMTAVEQMIAVIGALLAEGERGAESLEILISKIHPDLLADIVITNMKHLPKTPPPLARIGNLPVTRQLSSQVSQSQVIATSVPTNAVQSLSGTGQALLPSTTAAVIGASSLPSDTSNFSNLPADSKRDPRRDPRRLDPRRVVVAPGGATVSITDDTGATKLEFDEPVSSIKPVSLHVVTADDNTPSDLTVKLKNDDMISEGASVSGPDQVIPKTEVQERPGDIHRIAEADTSFGPSVSSREEDLSTVNLSDDIETIGTDSSSISEFDQFSLDVQVESTLEDTCLELPQLPPYVELSKEQLSMVKNMAVRHIINSYKHLHGTYCQQFWMPLLARLVAQIDDDDEFIMMLQKHILEDHWLKGHELVLHVLYHLHSLMILDSVENASSSAVLYEKFLLGVAKTLLDSFPASDKSFSRLLGEVPLLPESSLKILNDLCYSDVIGHDGKVIRDIERVTQGLGAIWSLILGRPQNRQACLGIALKCALHPQDEIRAKAIRLVTNKLFQLSYISGDVEKFATKMLLSAVEHDVSDTGLLQSGPGATEHRGEAEVEGHEISTSQVSESTISEDDSTRVAKPLIQNVPSISFSEAQRLISLFFALCIKKPSLLQIVFNVYGQAPKTVKQAFHRHIPIVVRALGQSYSELLRIISDPPQGSENLLTLVLQILTQDTTPSSDLISTVKRLYETKFRDVTILVPLLSSLSKQEVLPIFPRLVDLPLEKFQRALAHILQGSAHTGPALTPVEVLVAMHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAIDAFPALVDFVMEILSKLVTRQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPPQQLESALNRHSNLRGPLASYASQPTIRSTLSRSILAVLGLANETHVQQHLSTSLHSSDTSSSVHGATLT 1342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01001 1342 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1341 - -
Phco7g01001 1342 MobiDBLite consensus disorder prediction 542 556 - -
Phco7g01001 1342 Pfam Symplekin tight junction protein C terminal 1104 1282 IPR022075 -
Phco7g01001 1342 MobiDBLite consensus disorder prediction 948 983 - -
Phco7g01001 1342 MobiDBLite consensus disorder prediction 384 413 - -
Phco7g01001 1342 Gene3D - 1 345 IPR011989 -
Phco7g01001 1342 SUPERFAMILY ARM repeat 10 1237 IPR016024 -
Phco7g01001 1342 MobiDBLite consensus disorder prediction 532 556 - -
Phco7g01001 1342 MobiDBLite consensus disorder prediction 334 413 - -
Phco7g01001 1342 Pfam Symplekin/PTA1 N-terminal 96 320 IPR032460 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01001 Phco-Chr7 8197966 8223095 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01001 7 8197966 8223095 Phco7g01001 7 8197966 8223095 ECH