Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01000 ATGGCTTCGTTTCGGCGGACTCTGTCGCCGGCGTATCCCGATCGCCAGTACCTAAACGGTTCGTTTCCGGTTTCCTCTCCGACGCACAAGCTCCCCTCCGCGAACGCCAAGTACTCGTCGCCGCTGCCGGCGCTTGCAGCGGCACTCCAGCAACTCGTCGGCGGCGTGTTCACGCGCCGGCACGGTCGGAAAGGAAAGTGGAGACGGGCGGCGTTCAGGTGCGTGCTGTGCTTCTTCGTAGGGTTCTTGCTAGGCATGTTCCCGTTTGGCCACATGGCGGAGGACATTCGGTCGCACGAAATGAAGCCGCCGCTGCCGCAGGCGAACAACGCGCAGCAGCTGCTCCAGGAAGATCGCGTTCTACGGAATCGCGTCGAGGAGGGTTTCGTGATCGATCCGGTGAGCCTAAGCGCGGAGAGGGAGAGGCAGAGCGATAGGTTCGATTTTGTGCCGAGGAAGCCGCTGATTTTGGTGACACCGACGTACGGCCGCGCCTTTCAGGCGTATTTCCTGAACCGGTTGGGGCAGGTGCTGCGGCTGGTGCCGCCGCCAGTGGTATGGATTGTGGTGGAGATGAAAGCGGCGTCGATGGAGACGGCAGAGGTACTGAGGAAGACGGGCGTTATGTATAGGCATTTAGTGTGCAATAAGAATTTGACGGATGTGAAGGACAGGGGGGTTCATCAGAGAAACACAGCGTTGGAACACATTGAGCGTCATAGGCTCGATGGGATTGTTTACTTTGCGGACGATGATAATGTGTATTCTCTTGAGTTGTTTGACTCCTTGAGAGAAATCAGCCGCTTTGGTACTTGGCCTGTTGCCATGCTTGCGCCAAGCAAGAACAAGGCCATTTTGGAGGGTCCTGTATGCAATGCAAGCCAAGTGATCGGATGGCATACAAATGAGAAAAGTAAAAGACTTCGTAGATTTCATGTTGATATGTCTGGATTTGCATTCAATAGCACAATCTTGTGGGATCCAAAACGATGGCGGCGCCCTTCTTCAAATCCCATTAGACAGTTAGACACAGTGAAGGAAGGTTTTCAAGAGACCACCTTTATAGAACAATTGGTGGAAGATGAAAGTCAAATGGAAGGTTCACCTCGTGGTTGTTCAAAAATAATGAATTGGCATATCCATTTGGGTGCTCATAATATAGTTTACCCAAAAGGTTGGGTGCTTCAGAAAAACCTAGATGCCATCATACCTGTCAATTTGCCCATATTTGGTATTGGTTCATCACAGAATAGATGGATGCATGAGTTAGCCACCATTGGCAGTAATGCATTGTGTCGCCGGGCCAAATAG 1311 0.5202 MASFRRTLSPAYPDRQYLNGSFPVSSPTHKLPSANAKYSSPLPALAAALQQLVGGVFTRRHGRKGKWRRAAFRCVLCFFVGFLLGMFPFGHMAEDIRSHEMKPPLPQANNAQQLLQEDRVLRNRVEEGFVIDPVSLSAERERQSDRFDFVPRKPLILVTPTYGRAFQAYFLNRLGQVLRLVPPPVVWIVVEMKAASMETAEVLRKTGVMYRHLVCNKNLTDVKDRGVHQRNTALEHIERHRLDGIVYFADDDNVYSLELFDSLREISRFGTWPVAMLAPSKNKAILEGPVCNASQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRPSSNPIRQLDTVKEGFQETTFIEQLVEDESQMEGSPRGCSKIMNWHIHLGAHNIVYPKGWVLQKNLDAIIPVNLPIFGIGSSQNRWMHELATIGSNALCRRAK 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01000 436 CDD GlcAT-I 153 382 IPR005027 GO:0015018|GO:0016020
Phco7g01000 436 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 154 400 IPR029044 -
Phco7g01000 436 SUPERFAMILY Nucleotide-diphospho-sugar transferases 154 399 IPR029044 -
Phco7g01000 436 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 66 400 IPR005027 GO:0015018|GO:0016020
Phco7g01000 436 FunFam Glycosyltransferases 154 396 - -
Phco7g01000 436 Pfam Glycosyltransferase family 43 174 381 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01000 Phco-Chr7 8192418 8196008 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01000 7 8192418 8196008 Phco7g01000 7 8192418 8196008 ECH