Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00983 ATGGTCACAGTGCAGAGGCAGAGAGATAATTGTTTGGCAACACATTTCCGTCGTTCTCTGCCGTTCATCATCGACGCCGTCGCTGTTTTGTTTCGGTGGGGTTCTGTTCCAATGGCGTCTTCTAAGAGGCCAAATGCAGAGCCCAACGGGAAAGGGAAACGCCAAAAATCATCTGGTGGTTTTTCGTCGTTGGATGTTTCTCCAGGGAGTGCCGTGTTCCGTTTGCTCTGTCCCGTTTCAAGAATCGGCAGTGTTATTGGCAAAGGTGGTGCCATCATTTCACAAATTCGGCAAGAAACTGGTGTGAAGGTCAAGATTGAGGAAGCTATACCTGGGTGTGATGAAAGGGTTATCACTATCTCAGGTTCTGATAAAGAAACTGAAGAAGATCATGCAGAGCAGGTAAGGGAGGTTAACAATGATGATGCTGGAGTCGAGGGAAAGGGGGATGAGAAGGATGGTGGTGATGGTGATGGTAATGAAGAGAAAGAAGATAAAAGTTCTGTTATCGTTGAAGATTCTCCTAGTGAGAAGGGAAATTCAGCCATTCGGAAGGCTATATCACTAGTTTTTGAGAGAATGGTTGAGGGAGTAGAGGAGACAAGTGAAGGGGACGAGGAAAGTAATAAATCTTCTTCCCTTGTTTTTAGGTTACTTATTCTTACTACTCAAGTTGGATGCCTCCTAGGAAAGGGTGGTAGTGTGATCAAGAGAATGGCAGCTGAGAGTGGGGCACATATTCGGATCCTTCCTAAAGACAAACTTCCAGCGTGTGCATCAGCTTCTGATGAGATAGTTCAGATCTCGGGAGGAGTAGATGTTGTCAGGAAAGCTCTTCAATCTGTTTCTCATCAGCTATTGGAAAATCCACCACGGGATCATGAATTGTCCACTAATTTTAATGGGCCTTCTCATTCATCTGGACAATTCCCATCACACAGCCGTTCTTTTGGTGGTCAAGGAGTACCTTTTGCTACTGCCCATGATATTTCTGTTTTTCATTCAGCCCCTCAATTGATTTCCAAGTTTCATGAAGGTGCCATTCACGGTCGCACGAGACCTCTACAGGAAATGCTTACTTTTTGTTTATTGTGTCCTGTGGAAAGGGTAGGAAATGTAATTGGTAAAGGTGGAACAATCATAAAGGCACTGCAGCAAGAGACCGTAAGTGAAATCAAGATTGTAGAAAGCCCTCCAGATTCAGAGGACTGTGTTATTGTTATATCTGGTCCAGCGCACCCAGATGATAGAGTATCCCCTGTGCAAGAGGCTGTCTTTCGTGTGCAAACTAGAATAGCCAAGCCTATACCTGATGCCAAAGAACATACTATGTTAGCCAGGTTTCTTGTTTCTTCCAATCAAATAGGTTGTCTCCTCGGCAAGGGTGGTTCCATCATAACTGAAATGAGGAAGAAATCAGGGGCCCATATCCGTATATTAGGAAAGGATAAGGTTCCAAAGTGTGCTTCAGAGGATGAAGAAGTAATTCAGGTAAATGGAGAAATTGAGGCAGTGCATGATGCTCTTATGCAAATAACCACTAGATTAAAACATAATTTCTTTCGTGATTCACATCCATCTGTCAATTATCCTTCAAATCCTCTATTTATGGATCAACTTCCTCCATTCCCACCTTATTTAGGAAGGCGGGGACTATCACCTCCTGGGATGTATTCTGACATGGGTCCTCCACCTCCTCATGCGGGTTTTCATCTTGATGACCGCCCTCCCTTTTTGAATAATATGCATAGACCAGGCATTCCTCCTCACATATCTGAAAGGAAGCCTTGGGGTTCTCAGGGGGTACTTGAAGGTGGCTCACGCATTGGCTTGCCAGACTATCCAGGAGGTCCTCCTAGAAGAATTTCAGGATTTGCAGGGGGGAGCCAACCAATTATCACAAGTACCACTGTTGAAGTTGTTGTTCCTCGAGCACTGGTGCCTGTAATATGCGGGGAAGATGGTGAATGCCTGAAACAAATACTTCAGATCTCTGATGCAAATATTACTATAACTGATCCAAAGCCTGGAGCTGTGGAAACTAAAATTATAATATCCGGAACCCCAGAGCAGACTCATGCAGCTCAAAGTCTTATTCAGGCATTTGTAATGAGTGAGAGGGAGTCTGGTTGA 2133 0.4444 MVTVQRQRDNCLATHFRRSLPFIIDAVAVLFRWGSVPMASSKRPNAEPNGKGKRQKSSGGFSSLDVSPGSAVFRLLCPVSRIGSVIGKGGAIISQIRQETGVKVKIEEAIPGCDERVITISGSDKETEEDHAEQVREVNNDDAGVEGKGDEKDGGDGDGNEEKEDKSSVIVEDSPSEKGNSAIRKAISLVFERMVEGVEETSEGDEESNKSSSLVFRLLILTTQVGCLLGKGGSVIKRMAAESGAHIRILPKDKLPACASASDEIVQISGGVDVVRKALQSVSHQLLENPPRDHELSTNFNGPSHSSGQFPSHSRSFGGQGVPFATAHDISVFHSAPQLISKFHEGAIHGRTRPLQEMLTFCLLCPVERVGNVIGKGGTIIKALQQETVSEIKIVESPPDSEDCVIVISGPAHPDDRVSPVQEAVFRVQTRIAKPIPDAKEHTMLARFLVSSNQIGCLLGKGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHDALMQITTRLKHNFFRDSHPSVNYPSNPLFMDQLPPFPPYLGRRGLSPPGMYSDMGPPPPHAGFHLDDRPPFLNNMHRPGIPPHISERKPWGSQGVLEGGSRIGLPDYPGGPPRRISGFAGGSQPIITSTTVEVVVPRALVPVICGEDGECLKQILQISDANITITDPKPGAVETKIIISGTPEQTHAAQSLIQAFVMSERESG 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00983 710 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 356 699 - -
Phco7g00983 710 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 635 704 IPR036612 GO:0003723
Phco7g00983 710 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 203 293 IPR036612 GO:0003723
Phco7g00983 710 ProSiteProfiles Type-1 KH domain profile. 443 512 - -
Phco7g00983 710 MobiDBLite consensus disorder prediction 40 65 - -
Phco7g00983 710 Gene3D K Homology domain, type 1 70 140 IPR036612 GO:0003723
Phco7g00983 710 MobiDBLite consensus disorder prediction 286 318 - -
Phco7g00983 710 MobiDBLite consensus disorder prediction 51 65 - -
Phco7g00983 710 Pfam KH domain 217 282 IPR004088 GO:0003723
Phco7g00983 710 Pfam KH domain 447 512 IPR004088 GO:0003723
Phco7g00983 710 Pfam KH domain 637 700 IPR004088 GO:0003723
Phco7g00983 710 Pfam KH domain 363 412 IPR004088 GO:0003723
Phco7g00983 710 Pfam KH domain 73 127 IPR004088 GO:0003723
Phco7g00983 710 Gene3D K Homology domain, type 1 357 435 IPR036612 GO:0003723
Phco7g00983 710 ProSiteProfiles Type-1 KH domain profile. 213 282 - -
Phco7g00983 710 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 67 125 IPR036612 GO:0003723
Phco7g00983 710 CDD KH-I_PEPPER_rpt1_like 72 133 - -
Phco7g00983 710 SMART kh_6 357 433 IPR004087 GO:0003676
Phco7g00983 710 SMART kh_6 69 139 IPR004087 GO:0003676
Phco7g00983 710 SMART kh_6 212 287 IPR004087 GO:0003676
Phco7g00983 710 SMART kh_6 442 517 IPR004087 GO:0003676
Phco7g00983 710 SMART kh_6 634 704 IPR004087 GO:0003676
Phco7g00983 710 ProSiteProfiles Type-1 KH domain profile. 635 699 - -
Phco7g00983 710 Gene3D K Homology domain, type 1 634 707 IPR036612 GO:0003723
Phco7g00983 710 MobiDBLite consensus disorder prediction 117 180 - -
Phco7g00983 710 CDD KH-I_PEPPER_rpt1_like 359 426 - -
Phco7g00983 710 CDD KH-I_PEPPER_rpt2_like 215 283 - -
Phco7g00983 710 Gene3D K Homology domain, type 1 441 519 IPR036612 GO:0003723
Phco7g00983 710 Gene3D - 156 290 - -
Phco7g00983 710 MobiDBLite consensus disorder prediction 286 316 - -
Phco7g00983 710 ProSiteProfiles Type-1 KH domain profile. 70 135 - -
Phco7g00983 710 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 357 443 IPR036612 GO:0003723
Phco7g00983 710 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 439 520 IPR036612 GO:0003723
Phco7g00983 710 CDD KH-I_PEPPER_rpt2_like 445 516 - -
Phco7g00983 710 ProSiteProfiles Type-1 KH domain profile. 358 425 - -
Phco7g00983 710 MobiDBLite consensus disorder prediction 119 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00983 Phco-Chr7 7986003 7994227 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00983 7 7986003 7994227 Phco7g00983 7 7986003 7994227 ECH