Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00939 ATGGAAGGCGCCGGGAAACCTCTGAAGTCCGGCAACCTGTCGCGTAAGGTGGTTGATTTGGCCGTGGGAGAGGCACACAATCTCATTCTTACTGGGGATGGCAGTGTGTACAGTTGGGGTAGGGGAATGTTTGGACGGATTGGGAGTGGCTCAGAAAAGGACGTGCTTTTTCCAGTACAACTCAACTTTGGAAACCCGAATCCAAATGGAACACAAGACACTGTCAAGATAGTGGGAATTTCTGCTGGAGCTTATCATAGTCTCGCTCTTGCAGCATTGACAGACATCTGCTATTTTATTGACTGCATTTTTAAAAGTAACTTGACATGCATGCAAGCTACTGTTGCACCGAAGTTTGTTGAATTTATGTTCTGTACTAGCACCTACACCCTTGACTACTGTATGGATGGTCAACTTGGTACAAATGGAGAGGAATCACATGACCATGAATCTGATGTTGGAGACTCTTCTTTAGTGCCCCGCTTACTGAAGAGGTTTGATGAATTGCACTCCGTCAATTCTTCATCGGGTGTGTCTGAAGCAGAAGCTAAAACATCACTGAAGATATGTGCTGTCAAAGCTGGAGGAATGATGTCTCTGGCTATTGATAACCGTGGGACCCTGTGGATGTGGGGAAACTGCCCACAACAAATCAAAGAAGGTGAGTTAGCCCTTGTAAGCAGTTTCACTCCAACTCCAGTTTGGGATTTTCAGGGTCGATCTGTTGTCAAGGTTGCATGTGGAAATGAGCATGTCGTAGTGCTGGCTAGTGCTGGGGAATCATACAATGGTGAAGATCTAGTATGCTACTCTTGGGGTTATAACACCCATGGCCAATTAGGCTTAGGAGATAGAGAGAGCAGGCTGCATCCGGAAGTTGTTAAAACATTTGATGAGGAGTCATCACCCTATGAGGTGGCATGTGGTGCCTATCACACTGCTTTGCTCACTCGTATGAAGAAAACTAGTGATACATTAGACAGCACATGCTGGACCTTTGGCCTTGGAGACAATGGCCAGCTTGGGCATGGAACAACACAAAGCACAATATTTCCTACACCTGTTAAAGAATTGCCACAAAATGTATCCCTTATTTGTGTTGACTGTGGTTTGTTTCATACAAGCGTAGTTTCCTCAGGTGGGGATGTGTGGTCATGGGGAATGGAGAAGGGTCTTGGCTTATGCCCTGATGCTAGTCGAGCTGGAACAGATTCTGGTGATGCACTGTCTCCCCGTCTTATGTCATGGAAGCCAAATCAACCTAAATTTCCAGATCCAGTTAAAGTTGCATGTGGAGCCGCACATACTGTTATAATTGCGCAAGGGGGATATAGAATGTGGTCTTGGGGTAGGGGAAGAAGTGGAGTTCTTGGGGATGGCAAAGGCGAAGATTGTTACACTCCCACGCTCGTACTATGGCCTCAAATGATGGAGGATTCTGAGGAAGAGGAAGTAAAAAGCAATGGTGAGCAAGATAAGGCTAGAGAAGAAGAGACTGAAGCAACAACAGAAGCAGAAGAAAAACTATCCTCAGCATTGATTGAGCTGAAGCTGCTTCAAACAAAGCTATCTGTGATGAAAAAATATGTCAGTATACTTCATGGTTCTGTTTTTGGAAAGCCTTTTGAGGAGCAAGATATTCCTGATTCATTGCAGAATTCAGGTTCACTTGACATTGGAAAAGAATGGGAGAAGATGTTAGGTACAGCAGATCATAGGAAGCTAATTAGGTTGGAAATGTTTTACCGAGACATGCTTGCTGGAGTAAAAGATGAACTAATGAGGAGAAGGATCAAGGAAATTGTAAAGGAGTGTCTCCAATCTTCAGAGGTGTAA 1836 0.4461 MEGAGKPLKSGNLSRKVVDLAVGEAHNLILTGDGSVYSWGRGMFGRIGSGSEKDVLFPVQLNFGNPNPNGTQDTVKIVGISAGAYHSLALAALTDICYFIDCIFKSNLTCMQATVAPKFVEFMFCTSTYTLDYCMDGQLGTNGEESHDHESDVGDSSLVPRLLKRFDELHSVNSSSGVSEAEAKTSLKICAVKAGGMMSLAIDNRGTLWMWGNCPQQIKEGELALVSSFTPTPVWDFQGRSVVKVACGNEHVVVLASAGESYNGEDLVCYSWGYNTHGQLGLGDRESRLHPEVVKTFDEESSPYEVACGAYHTALLTRMKKTSDTLDSTCWTFGLGDNGQLGHGTTQSTIFPTPVKELPQNVSLICVDCGLFHTSVVSSGGDVWSWGMEKGLGLCPDASRAGTDSGDALSPRLMSWKPNQPKFPDPVKVACGAAHTVIIAQGGYRMWSWGRGRSGVLGDGKGEDCYTPTLVLWPQMMEDSEEEEVKSNGEQDKAREEETEATTEAEEKLSSALIELKLLQTKLSVMKKYVSILHGSVFGKPFEEQDIPDSLQNSGSLDIGKEWEKMLGTADHRKLIRLEMFYRDMLAGVKDELMRRRIKEIVKECLQSSEV 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00939 611 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 15 95 - -
Phco7g00939 611 MobiDBLite consensus disorder prediction 479 505 - -
Phco7g00939 611 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 34 93 IPR000408 -
Phco7g00939 611 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 381 442 IPR000408 -
Phco7g00939 611 MobiDBLite consensus disorder prediction 478 506 - -
Phco7g00939 611 SUPERFAMILY RCC1/BLIP-II 122 474 IPR009091 -
Phco7g00939 611 Pfam Regulator of chromosome condensation (RCC1) repeat 381 439 IPR000408 -
Phco7g00939 611 Pfam Regulator of chromosome condensation (RCC1) repeat 330 376 IPR000408 -
Phco7g00939 611 Pfam Regulator of chromosome condensation (RCC1) repeat 33 90 IPR000408 -
Phco7g00939 611 Pfam Regulator of chromosome condensation (RCC1) repeat 270 316 IPR000408 -
Phco7g00939 611 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 306 316 IPR000408 -
Phco7g00939 611 Coils Coil 477 497 - -
Phco7g00939 611 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 206 258 IPR000408 -
Phco7g00939 611 SUPERFAMILY RCC1/BLIP-II 13 92 IPR009091 -
Phco7g00939 611 Gene3D - 122 507 IPR009091 -
Phco7g00939 611 Gene3D - 4 99 IPR009091 -
Phco7g00939 611 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 328 380 IPR000408 -
Phco7g00939 611 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 267 319 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00939 Phco-Chr7 7589211 7593102 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00939 7 7589211 7593102 Phco7g00939 7 7589211 7593102 ECH
Phco7g00939 7 7589211 7593102 Phco2g00837 2 9756807 9765112 PCT