Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00927 ATGGCAACTTCATATAAAGCATTCCTATTGAATTGCTCCATTCAGAAAAGACCCTCCCATGTCTCAAACAAATCTCCTCACTTCAACCTTCCACCCTTCCCTGCCTTTAAGCCACTGAAGAAAATTCTTCCTGGAGTCCCTTTACAAATTGATGTTCAAAAGACTATCACAGACACTGCAGCTAAATTGCTTGACGCTTTCGTGGATTCATTCTTTGAATTTGTTGACCAACCACTGCTTCCATCTCAGAGTAACTTTGCTCCGGTGGAGGAGTTGGGTGAAGCCATACTTGTTACCAGCATCCAAGGACGAATTCCAGATGATTTTCCAGAGGGTGTCTACATTAGAAATGGACCAAATCCACTTTTTGGAGGGTTAAAATCAACAAATTCTATCTTTGGGAGGTCAAGTCACATTTGGGTGGAAGGAGAGGGAATGCTTCACGCAATTTATTTTAAAAGGTCAAGTGAAGGGAGCTGGAAGGTCCTTTACAACAACAAGCACGTTGAAACCGATACATACAAGATTGAAAAGCAACTCAGCAAACCATCGTTTCTACCGGCCATAGAAGGCGACTCACTCGCCATTTTGTCTGCTTATCTGCTTAACTGGTTGCGATTTGGCAAAGTAAACAAGTACATCAGCAACACCAATGTGTTTGAGCAGTCTGGCAAGTTTTACTCGGTTGCCGAAAATCACATTCCTCAAGAGATTGATATCTTCACACTAAAAACTTTAAGAAATTGGGATGTCAATGGCGCCTGGGATCGTCCTTTTACCAGTCATCCAAAGAAGGCTCCAGATACAGGGGAGCTAGTTACATTAGGGGTTGCAGCAACCAAACCTTTTGCCGTTGCTGGGATTATTTCTGCTGATGGAGAGAAATTGGTTCGAAAAGTTGACCTCCAACTTAATAGGTCCACTCTTTGTCATGACATTGGTGTTACAAAGAGGTACAATGTGATCATGGATTTTCCTCTAACTATTGATCTAAACAGAGTTCTTAGAGGAGGCCAATTAATAAAGTATAATAAGGAGGAATACGCAAGGATTGGGATACTGCCACGCTATGGTGATGCCAACTCAATCAAATGGTTTGAGGTGGAACCTAATTGCACTTTTCACATTATCAACTCTTTTGAGGATGGGCACGAGGTTGTAGTGAGGGGTTGCAGATCTCTAGATTCACTGATTCCTGGACCTGTCCTAAGTTTGAAGGAATACGAGTGGTTATCTCGCTGTTACGAGTGGCGATTGAACATGCACACCGGAGAAGTCAAGGAGAAAGATATCTGTGGAGCCAACGTAGTTTATATGGATTTTCCTGTGATCAATGGAAAATTCATAGGAGTGAGGAATAGATATGCATACACCCAAGTAGTCGATCCAATTGCAAGCTCTACACAAAACGCGCCAAAATATGGAGGCTTGGCAAAACTCTACTTTGAAGAATCCTGTACAGAGTTCTCCACGGGAGACAAAGAGCAACCTGAAGAGCCTATAAGAGTGGAGTGCCATATGTTTGAGAAGAACACATTTTGCAGTGGGGCTGCCTTTGTCCCCAGAGAAGGGGGTCTTGAAGAAGATGACGGTTGGATCATAGCTTTTGTTCACAATGAAGATACTAACATATCAGAAGTTCATATAATCGACGCAGAGAAGTTTTCTGGTGAAATGGTTACCAAAATTACCATGCCTCGCAGAGTACCATATGGGTTTCATGGAGCTTTCATGCAAATTTAG 1743 0.4246 MATSYKAFLLNCSIQKRPSHVSNKSPHFNLPPFPAFKPLKKILPGVPLQIDVQKTITDTAAKLLDAFVDSFFEFVDQPLLPSQSNFAPVEELGEAILVTSIQGRIPDDFPEGVYIRNGPNPLFGGLKSTNSIFGRSSHIWVEGEGMLHAIYFKRSSEGSWKVLYNNKHVETDTYKIEKQLSKPSFLPAIEGDSLAILSAYLLNWLRFGKVNKYISNTNVFEQSGKFYSVAENHIPQEIDIFTLKTLRNWDVNGAWDRPFTSHPKKAPDTGELVTLGVAATKPFAVAGIISADGEKLVRKVDLQLNRSTLCHDIGVTKRYNVIMDFPLTIDLNRVLRGGQLIKYNKEEYARIGILPRYGDANSIKWFEVEPNCTFHIINSFEDGHEVVVRGCRSLDSLIPGPVLSLKEYEWLSRCYEWRLNMHTGEVKEKDICGANVVYMDFPVINGKFIGVRNRYAYTQVVDPIASSTQNAPKYGGLAKLYFEESCTEFSTGDKEQPEEPIRVECHMFEKNTFCSGAAFVPREGGLEEDDGWIIAFVHNEDTNISEVHIIDAEKFSGEMVTKITMPRRVPYGFHGAFMQI 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00927 580 PANTHER BETA-CAROTENE DIOXYGENASE 94 578 IPR004294 GO:0016702
Phco7g00927 580 Pfam Retinal pigment epithelial membrane protein 87 578 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00927 Phco-Chr7 7465787 7470437 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00927 7 7465787 7470437 Phco7g00927 7 7465787 7470437 ECH