Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00924 ATGGATTTCTATGGCAAGGCCACCCTCCTCAGCCTCATGGACAACGAAAAGCCAGAACCACCACAATCCCCTCTTCACCTTCATCTCCAAACCCACCGAGAGATAAGCGAACAAGACCTTCAGTTCAGTCCCCCAAGGCCTTCAAGCTCCGACGGCATGTTCCCCATCATGCCCGATTCACCATGGACACTTTCCCCTATCCCAACCCCCTCATCTTCTTTGCTTTATCACTGCATCGCTTCGCTCCACCGCCACGAAGGTAACATCTACGCAATCGCTGCTTCAAAGGGTTTGGTCTTCACCGGCTCCAACAGCAGCAGAATCCGTGTCTGGAAGCAGCCAGATTGCATGGACAGAGGGTATCTCAAAGCCAGCTCCGGTGAGGTCAGAGCCATTCTCGCTTATAGCAACATGCTTTTCTCCACGCACAAGGACCACAAGATAAGGATTTGGACCTTCACTGCTTCAGATAGCTTCAAGTCCAAGAAACTAGGCACTCTCCCTAGAAAAACCTCCATCCTCATGTTCCCCTCGAGAGGGAAGAACACGCCCAAGCACAAAGATTCCGTTTCTTGCATGGCGTATTACCACTCCGAGGGTCTCCTTTACACCGGCTCCCACGACAGAACCGTGAAGGCGTGGCGTGTTTCTGATAGAAAATGCGTTGACTCGTTCGGCGCACACGAGGATAACGTCAACGCCATATTGGTGAACCAAGACGATGGTTGTCTTTTCACCGGTTCCTCCGACGGGTCGGTGAAGATATGGAGAAGGGTGTACACTGAAGACTCGCACACTCTCACCATGACTCTCAAATTCCAACCCTCCCCCGTCAATGCTCTTGCGTTGAGTTGCTCGTTCAACCACTGCTTCCTCTATTCGGGTTCCTCCGATGGGATGATAAACTTCTGGGAGAAGGAAAGGTTGTGCTACAGGTTCAACCATGGAGGGTTCTTGCAGGGTCACCGTTTCGCGGTTCTTTGTTTAGCCACAGTAGGGAACATGATATTCAGTGGGTCAGAGGACACCACCATTAGGGTGTGGAGGAGAGAGGAAGGAAGTTGCTACCACGAGTGTTTGACGGTTTTGGATGGACACAGAGGACCAGTTAGATGCTTGGCTGCATGCCTCGAGATGGAAAAGGTTGTGATGGGGTTCTTGGTGTATAGTGCTAGTTTGGACCAAACATTCAAAGTTTGGAGGATTAAGGTTTTGCCGGATGAAAAAATGTGCATGGACTACAGTGAGCAGTGTGAAGCCCAGAGGGTGAAGATTAGGGACTACTCTATGAGCCCCGTTCTGTCGCCTTCCTGGGTGGAGAAGAAGCTTCAGGGTAGCTATTTTCAGTAG 1350 0.5096 MDFYGKATLLSLMDNEKPEPPQSPLHLHLQTHREISEQDLQFSPPRPSSSDGMFPIMPDSPWTLSPIPTPSSSLLYHCIASLHRHEGNIYAIAASKGLVFTGSNSSRIRVWKQPDCMDRGYLKASSGEVRAILAYSNMLFSTHKDHKIRIWTFTASDSFKSKKLGTLPRKTSILMFPSRGKNTPKHKDSVSCMAYYHSEGLLYTGSHDRTVKAWRVSDRKCVDSFGAHEDNVNAILVNQDDGCLFTGSSDGSVKIWRRVYTEDSHTLTMTLKFQPSPVNALALSCSFNHCFLYSGSSDGMINFWEKERLCYRFNHGGFLQGHRFAVLCLATVGNMIFSGSEDTTIRVWRREEGSCYHECLTVLDGHRGPVRCLAACLEMEKVVMGFLVYSASLDQTFKVWRIKVLPDEKMCMDYSEQCEAQRVKIRDYSMSPVLSPSWVEKKLQGSYFQ 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00924 449 Gene3D - 62 170 IPR015943 GO:0005515
Phco7g00924 449 PRINTS G protein beta WD-40 repeat signature 202 216 IPR020472 -
Phco7g00924 449 PRINTS G protein beta WD-40 repeat signature 336 350 IPR020472 -
Phco7g00924 449 PRINTS G protein beta WD-40 repeat signature 244 258 IPR020472 -
Phco7g00924 449 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 52 404 IPR045182 -
Phco7g00924 449 CDD WD40 78 401 - -
Phco7g00924 449 SMART WD40_4 312 349 IPR001680 GO:0005515
Phco7g00924 449 SMART WD40_4 218 257 IPR001680 GO:0005515
Phco7g00924 449 SMART WD40_4 115 152 IPR001680 GO:0005515
Phco7g00924 449 SMART WD40_4 177 215 IPR001680 GO:0005515
Phco7g00924 449 SMART WD40_4 75 112 IPR001680 GO:0005515
Phco7g00924 449 SMART WD40_4 264 305 IPR001680 GO:0005515
Phco7g00924 449 SMART WD40_4 356 401 IPR001680 GO:0005515
Phco7g00924 449 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 225 256 - -
Phco7g00924 449 Gene3D - 171 432 IPR015943 GO:0005515
Phco7g00924 449 ProSiteProfiles Trp-Asp (WD) repeats profile. 319 358 IPR001680 GO:0005515
Phco7g00924 449 Pfam WD domain, G-beta repeat 358 400 IPR001680 GO:0005515
Phco7g00924 449 Pfam WD domain, G-beta repeat 220 256 IPR001680 GO:0005515
Phco7g00924 449 Pfam WD domain, G-beta repeat 269 304 IPR001680 GO:0005515
Phco7g00924 449 Pfam WD domain, G-beta repeat 318 348 IPR001680 GO:0005515
Phco7g00924 449 Pfam WD domain, G-beta repeat 186 214 IPR001680 GO:0005515
Phco7g00924 449 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 183 217 - -
Phco7g00924 449 ProSiteProfiles Trp-Asp (WD) repeats profile. 183 224 IPR001680 GO:0005515
Phco7g00924 449 SUPERFAMILY WD40 repeat-like 77 403 IPR036322 GO:0005515
Phco7g00924 449 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 319 348 - -
Phco7g00924 449 ProSiteProfiles Trp-Asp (WD) repeats profile. 225 256 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00924 Phco-Chr7 7438010 7439359 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00924 7 7438010 7439359 Phco7g00924 7 7438010 7439359 ECH