Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00923 ATGGCTAAAGTAGCCACCATGTGCAATCACAAGATAGGAGGCATGGCGAAAATCGCTCTTGGAAGCGCCAGAGAGGCCACTCGACCAGATTGCATTCAGGCGCTCGTCGTTGAATTCATCGCCACCTTCCTCTTCGTCTTTGTTGGCGTTGCTTCTTCCATGCTCACTGAGAAGCTTGGTGGGGATGCACTCGTGGGGCTGTTTGTTGTGGCCGTGGCACATGCACTTGTGGTGGCCGTCATGATCTCCGCCGCCCACATCTCCGGTGGCCACCTGAACCCTGCCGTCACCATTGGCCTCCTTGCCGGCGGTCACATCACCGTCTTCCGTTCCATCCTCTATTGGATTGATCAATTAGTTGCATCTGCCGCAGCTTCTTATCTCCTTTACTTCCTTTCTGGAGGACAGACAACTCCGGTTCATACGCTGGCCGCGGGAGTTGGGTATGGTCAAGGGGTAATTTGGGAGATTGTGTTGACCTTTTCTTTGCTGTTCACTGTCTATGCCACCATGGTGGATCCAAAGAAGGGACCACTTGCTGGGCTTGGCCCAACTCTTGTTGGGTTTGTAGTGGGGGCCAACATCCTCGCTGGTGGGGCTTACTCCGCGGCTTCTATGAACCCAGCGCGCTCTTTTGGGCCTGCCTTGGTTACTGGCAACTGGACCGATCATTGGGTTTACTGGGTTGGGCCTCTCATCGGTGGTGGGCTTGCTGGTTTCATCTATGAAACTTTCTTCATTGATCGATCTCACGCTCCTCTTCCTCGTGATGAAGAATTCTAA 783 0.5364 MAKVATMCNHKIGGMAKIALGSAREATRPDCIQALVVEFIATFLFVFVGVASSMLTEKLGGDALVGLFVVAVAHALVVAVMISAAHISGGHLNPAVTIGLLAGGHITVFRSILYWIDQLVASAAASYLLYFLSGGQTTPVHTLAAGVGYGQGVIWEIVLTFSLLFTVYATMVDPKKGPLAGLGPTLVGFVVGANILAGGAYSAASMNPARSFGPALVTGNWTDHWVYWVGPLIGGGLAGFIYETFFIDRSHAPLPRDEEF 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00923 260 PRINTS Major intrinsic protein family signature 73 97 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco7g00923 260 PRINTS Major intrinsic protein family signature 110 129 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco7g00923 260 PRINTS Major intrinsic protein family signature 188 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco7g00923 260 PRINTS Major intrinsic protein family signature 225 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco7g00923 260 PRINTS Major intrinsic protein family signature 33 52 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco7g00923 260 PRINTS Major intrinsic protein family signature 155 173 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco7g00923 260 FunFam Probable aquaporin TIP1-1 16 258 - -
Phco7g00923 260 Pfam Major intrinsic protein 27 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco7g00923 260 SUPERFAMILY Aquaporin-like 25 255 IPR023271 -
Phco7g00923 260 ProSitePatterns MIP family signature. 91 99 IPR022357 -
Phco7g00923 260 CDD MIP 33 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco7g00923 260 PANTHER AQUAPORIN-8 18 252 IPR034294 -
Phco7g00923 260 Gene3D Glycerol uptake facilitator protein. 15 256 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00923 Phco-Chr7 7434103 7435303 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00923 7 7434103 7435303 Phco7g00923 7 7434103 7435303 ECH