Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00907 ATGTTTGAGTTTTTGACTTTGTCCCAAGTGCAGGCATCGAAGGCAAGGCTGTTCAAGGAGTACCATGAGGTGCAGCGAGAAAAGACTGTTGATCCTGATATTCAACTAGTCTGTGATGAATCTAACATTTTTAAATGGACGGCTTTTATCAAGGGTCCCTCTGAGACTCCTTATGAGGGGGGTGTGTTCCAGCTTGCTTTTTCTGTTCCGGAGCAGTATCCTCTACAGCCTCCTCAAGTCCGGTTTTTGACAAAAATATTTCATCCAAATGTTCACTTTAAGACTGGGGAGATTTGTCTAGATATCTTGAAAACTGCTTGGAGCCCAGCTTGGACACTTCAATCTGTCTGTAGGGCTATAATTGCTTTGATGGCCCATCCCGAACCTGACAGCCCACTGAATTGTGATTCAGGCAATCTTCTGCGTTCAGGCGATGTTAGAGGCTACCAATCGATGGCAAGAATGTACACAAGACTTGCAGCAATGCCAAAGAAAGGCTGA 501 0.4491 MFEFLTLSQVQASKARLFKEYHEVQREKTVDPDIQLVCDESNIFKWTAFIKGPSETPYEGGVFQLAFSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKTAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00907 166 FunFam protein PEROXIN-4 isoform X1 10 161 - -
Phco7g00907 166 SUPERFAMILY UBC-like 10 162 IPR016135 -
Phco7g00907 166 Coils Coil 7 27 - -
Phco7g00907 166 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 13 143 - -
Phco7g00907 166 Gene3D Ubiquitin Conjugating Enzyme 9 161 IPR016135 -
Phco7g00907 166 SMART ubc_7 15 162 - -
Phco7g00907 166 Pfam Ubiquitin-conjugating enzyme 16 156 IPR000608 -
Phco7g00907 166 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 12 162 IPR000608 -
Phco7g00907 166 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 87 103 IPR023313 -
Phco7g00907 166 CDD UBCc 16 157 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00907 Phco-Chr7 7285245 7287609 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00907 7 7285245 7287609 Phco7g00907 7 7285245 7287609 ECH