Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00902 ATGACCGACGAGAAAATCATAAACCTTTGTTATTCTCAATCTGAAATCTTCTGCAAATCTTTGTTGAGGTTTATCGCTATACCAGAAAGGAGATGTGTTTCTGAACAAACGGGACCAACAAAACCCAAGAAAATAGTTAATACAATCAGCATGCGCCCACCGGTTATTCTCAAAACTAACTCTCTCTCTGATTCTTATTCCTCGCCTTGCGATCGCAGACTCAACACTCTCGCCAGACATTTCATTAGCGTTCTTGAACCAATGGCTTCTAATGATAACATCTCCGCTTCGCCAACCACTGCTTCTGATTCCGTCTTCAACCACCTCGTTCGTGCACCTGAAGATCCTATCCTCGGGGTGACTGTTGCGTATAACAAAGATCCAAGTCCAGTTAAGCTCAACTTGGGCGTTGGTGCTTACCGAACTGAGGAAGGAAAACCTCTTGTTTTGAATGTAGTGAGGAAGGTTGAACAGCAGCTCATAAATGACTTGTCACGCAACAAGGAATATATTCCAATTGTTGGGCTTGCTGATTTTAATAAATTGAGTGCTAAGCTTATTTTTGGGGCTGACAGCCCTGCTATTCAAGAGAACAGGGTTACCACTGTTCAATGCTTATCCGGAACTGGTTCATTAAGAGTTGGGGGTGAATTTTTGGCTAAACACTATCACCAGCGGACTATATACTTGCCAACACCAACCTGGGGCAATCACCCCAAGGTTTTCAACTTAGCAGGGTTATCTGTCCAAACATATCGCTACTATGCTCCAGCAACACTAGGGCTTGACTTTGAAGGACTTCTAGAAGATCTTGGCTCTGCTCCATCTGGATCTATTGTTTTGCTACATGCATGCGCACATAACCCCACTGGTGTTGATCCAACCCTTGAGCAATGGGAGCAGATTAGGCAGCTAATAAGATCAAAAGCTTTGTTACCTTTCTTTGACAGCGCTTATCAGGGTTTTGCTAGCGGCAGTCTAGATGCAGATGCCCAACCTGTTCGTTTGTTTGTTGCTGATGGGGGTGAATTGCTGGTAGCACAAAGTTATGCAAAGAATCTGGGTCTTTATGGAGAACGTGTTGGAGCCTTAAGCATTGTCTGCAAGTCAGCTGATGTTGCAAGCAGGGTTGAGAGCCAGCTGAAACTTGTGATTAGGCCCATGTACTCAAGTCCTCCCATTCACGGTGCATCCATTGTGGCGGCCATTCTCAAGGACAGTGATTTGTTCAATGAGTGGACTATCGAGTTGAAAGGAATGGCTGATCGAATTATCAGTATGCGCCAACAACTTTTTGATGCTTTACGTTCCAGAGGAACACCTGGTGATTGGAGTCACATTATCAAACAAATTGGCATGTTTACTTTCACAGGATTGAATGCCAAACAAGTTTCCTTCATGACTAATGAGTACCATATATACATGACATCTGATGGGAGGATTAGTATGGCCGGTCTAAGTTCCAAAACAGTCCCACTTCTGGCAGATGCGATCCATGCAGCTGTAACCGGAGGTGTCTAA 1521 0.4425 MTDEKIINLCYSQSEIFCKSLLRFIAIPERRCVSEQTGPTKPKKIVNTISMRPPVILKTNSLSDSYSSPCDRRLNTLARHFISVLEPMASNDNISASPTTASDSVFNHLVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKVEQQLINDLSRNKEYIPIVGLADFNKLSAKLIFGADSPAIQENRVTTVQCLSGTGSLRVGGEFLAKHYHQRTIYLPTPTWGNHPKVFNLAGLSVQTYRYYAPATLGLDFEGLLEDLGSAPSGSIVLLHACAHNPTGVDPTLEQWEQIRQLIRSKALLPFFDSAYQGFASGSLDADAQPVRLFVADGGELLVAQSYAKNLGLYGERVGALSIVCKSADVASRVESQLKLVIRPMYSSPPIHGASIVAAILKDSDLFNEWTIELKGMADRIISMRQQLFDALRSRGTPGDWSHIIKQIGMFTFTGLNAKQVSFMTNEYHIYMTSDGRISMAGLSSKTVPLLADAIHAAVTGGV 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00902 506 PRINTS Aspartate aminotransferase signature 311 323 IPR000796 GO:0006520|GO:0008483
Phco7g00902 506 PRINTS Aspartate aminotransferase signature 280 299 IPR000796 GO:0006520|GO:0008483
Phco7g00902 506 PRINTS Aspartate aminotransferase signature 379 404 IPR000796 GO:0006520|GO:0008483
Phco7g00902 506 PRINTS Aspartate aminotransferase signature 447 465 IPR000796 GO:0006520|GO:0008483
Phco7g00902 506 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 349 362 IPR004838 GO:0003824|GO:0009058|GO:0030170
Phco7g00902 506 SUPERFAMILY PLP-dependent transferases 104 502 IPR015424 -
Phco7g00902 506 CDD AAT_like 133 486 - -
Phco7g00902 506 PANTHER ASPARTATE AMINOTRANSFERASE 100 503 IPR000796 GO:0006520|GO:0008483
Phco7g00902 506 Gene3D Aspartate Aminotransferase, domain 1 111 498 IPR015422 GO:0003824
Phco7g00902 506 Gene3D - 165 406 IPR015421 GO:0003824
Phco7g00902 506 FunFam Aspartate aminotransferase 395 498 - -
Phco7g00902 506 Pfam Aminotransferase class I and II 132 498 IPR004839 GO:0009058|GO:0030170
Phco7g00902 506 FunFam Aspartate aminotransferase 165 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00902 Phco-Chr7 7235878 7243334 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00902 7 7235878 7243334 Phco7g00902 7 7235878 7243334 ECH