Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00890 ATGGACTCAACGGAAAAAGGAAAAATAATCAAAATATCTTGCCACACGAATAAACGACACTATGATCTCATTTTCTCAGAAGAAGCAAAGGGGCGATCTAACCGTCTCCGTGGTCGTTCTACTCAACTTTCAGTGGCCATGGCTCCTCCGCCGCCGCAGTCTCATCGATCGCCGTCTCCGTCACAACCGTCAGGGAAGAGTGAAGTCTCCGATCTAAAATCACAGCTCCGGCAGCTTGCTGGGAGCCGAGCTCCGGGTGCTGATGATTCTAAGAGGGATCTCTTTAAGAAGGTGATTTCCAATATGACTATTGGTATTGATGTCTCGTCTCTCTTTGGCGAGATGGTAATGTGCTCTGCAACATCAGACATTGTTCTGAAAAAAATGTGCTATTTATACGTTGGGAACTATGCAAAGGTCAATCCTGATCTTGCACTTTTGACGATTAATTTTCTGCAAAGAGATTGCAAAGATGAGGATCCAATGATACGGGGACTAGCATTGAGGAGTTTGTGTTCTCTCCGGGTGGCAAATCTGGTGGAATATTTGGTTGGGCCATTAGGGTCTGGGTTGAAGGACAATAATAGTTATGTCAGGATGGTGGCAGTTATTGGGGTTTTGAAACTGTACCATATATCGGCTTCCACCTGTATAGATGCAGATTTTCCAGCAACACTGAAGCATTTGATGCTTAATGACCCTGATACTCAGGTAGTCGCAAATTGTTTGTCTGCTTTACAAGAAATTTGGACCTTAGAGTCATCCACATCAGAGGAAGCAGCCAGGGAGAGAGAAACTCTACTTAGCAAGCCAGTTGTATATCACCTTTTGAATCGCATTAAGGAATTCAGTGAGTGGGCACAATGTCTTGTACTGGAATTTGTGAGCAAGTACATTCCGGCAGATAGCAGTGAAATATTTGATATGATGAATCTCCTTGAAGATAGACTCCAGCATGCAAATGGTGCTGTTGTCTTGGCAACTGTTAAATTATTTCTACAGTTGACTTTGTCTATGGCTGATGTTCATCAGCAGGTATATGAGCGTATCAAAGCCCCTCTATTGACTCAAGTGAGCTCAGGAAGTCCAGAACAATCTTATGCAGTTTTAAGTCACTTGCATCTTTTGGTCATGCGTGCACCTTATATATTTTCCTCGGACTATAAACACTTCTATTGCCAGTACAATGAGCCATCATATGTTAAAAAGTTGAAGCTTGAAATGCTGACTGCAGTTGCAAATGAAAGCAACACATATGAGATAGTGACAGAACTATGTGAATATGCTGCAAATGTTGACATTCCCATTGCAAGGGAATCAATTCGAGCTGTTGGGAAGATAGCATTGCAGCAGTATGATGTCAATGCTATTGTTGATCGACTTCTCCAGTTTCTTGAGATGGAAAAGGACTATGTTACTTCTGAAGCTTTGGTGCTTGTGAAAGATCTGTTAAGAAAATATCCACAATGGAGTCAGGATTGTATTGCTGTTGTTGGAAATATAAGTAGCAAAAATGTCCAAGAACCCAAGGCTAAGGCAGCTCTTATATGGATGTTGGGAGAATATTCTCAGGACATGCACGATGCTCCATATGTCTTGGAGAGTTTAGTTGAAAATTGGGATGAGGAGCATTCCGCTGAGGTTCGCTTACATCTTCTTACTGCAGTTATGAAGTGTTTCTTTAAGCGTCCACCTGAAACTAAAAAAGCATTAGGTGCTGCATTGGCTGCTGGACTTGCTGATTTTCACCAGGATGTTCATGACAGGGCCTTATTTTATTACAGGCTTCTGCAATACAATGTATCTGTGGCAGAGAGTGTGGTTAACCCTCCAAAGCAAGCTGTTTCCGTCTTCGCTGATACCCAGAGCAGTGAAATCAAAGATCGCATATTTGATGAATTTAACAGTCTGTCTGTTGTATATCAAAAGCCTTCTTATATGTTCACTGATAAGGAACATCGAGGGACATTTGAGTTTGCAGATGAACTTGGAAATCTATCTATTACTGCAGAATCTGGAGAGTCTGTTGTTCCAGCTCAGAGAGTGGAAGCAAATGATAAGGATCTGCTTCTAAGTACTTCAGAAAAAGATGAAGGAAGAGAACCTGGTAGCAATGGTTCTGCCTACAGTGCTCCTTCCTACAATGGTTCATCTGTGCCTTCTACAACTTCACAACCACTTGCAGATTTGGCATTTCCAAGTACTGGCATATCAGGTCAAGCACCAGCTTCTAGCTTGGCAATTGATGATCTACTTGGTTTAGATTTTGCAGTTGGGACTGCAGCCACGCCTTCACCTCCTCCACCTCCTCCGTTGAACCTAAACCCCAAGGCTGTTCTGGATCCTGGCACATTTCAGCAGAAATGGCGTCAACTGCCAATATCTATATCAGAGGAATATTCCCTAAGTCCTCAGGGAATCGCATCCTTGACAACTCCCAATGCACTCCTGCGGCACATGCAAAGTCATTCAATACACTGCATTGCATCCGGCGGTCAGTCTCCCAACTTTAAGTTCTTTTTCTTTGCTCAGAAAGCAGAAGCAGCATCAATATATCTTGTAGAGTGTATAATCAACACATCATCGGCGAAGTCACAGATTAAAGTAAAAGCTGATGACCAAAGTTCATCCCAGGCATTCTCAACATTATTCCAATCAGCCTTATCAAAATTTGGTTTACCTTGA 2685 0.425 MDSTEKGKIIKISCHTNKRHYDLIFSEEAKGRSNRLRGRSTQLSVAMAPPPPQSHRSPSPSQPSGKSEVSDLKSQLRQLAGSRAPGADDSKRDLFKKVISNMTIGIDVSSLFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGSGLKDNNSYVRMVAVIGVLKLYHISASTCIDADFPATLKHLMLNDPDTQVVANCLSALQEIWTLESSTSEEAARERETLLSKPVVYHLLNRIKEFSEWAQCLVLEFVSKYIPADSSEIFDMMNLLEDRLQHANGAVVLATVKLFLQLTLSMADVHQQVYERIKAPLLTQVSSGSPEQSYAVLSHLHLLVMRAPYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTSEALVLVKDLLRKYPQWSQDCIAVVGNISSKNVQEPKAKAALIWMLGEYSQDMHDAPYVLESLVENWDEEHSAEVRLHLLTAVMKCFFKRPPETKKALGAALAAGLADFHQDVHDRALFYYRLLQYNVSVAESVVNPPKQAVSVFADTQSSEIKDRIFDEFNSLSVVYQKPSYMFTDKEHRGTFEFADELGNLSITAESGESVVPAQRVEANDKDLLLSTSEKDEGREPGSNGSAYSAPSYNGSSVPSTTSQPLADLAFPSTGISGQAPASSLAIDDLLGLDFAVGTAATPSPPPPPPLNLNPKAVLDPGTFQQKWRQLPISISEEYSLSPQGIASLTTPNALLRHMQSHSIHCIASGGQSPNFKFFFFAQKAEAASIYLVECIINTSSAKSQIKVKADDQSSSQAFSTLFQSALSKFGLP 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00890 894 Gene3D - 61 656 IPR011989 -
Phco7g00890 894 SUPERFAMILY ARM repeat 75 645 IPR016024 -
Phco7g00890 894 PANTHER ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER 61 859 IPR026739 GO:0016192
Phco7g00890 894 MobiDBLite consensus disorder prediction 674 727 - -
Phco7g00890 894 PIRSF Beta_adaptin 57 894 IPR016342 GO:0015031|GO:0030276
Phco7g00890 894 MobiDBLite consensus disorder prediction 706 727 - -
Phco7g00890 894 Gene3D - 763 892 IPR012295 -
Phco7g00890 894 FunFam Beta-adaptin-like protein 762 892 - -
Phco7g00890 894 SMART B2_adapt_app_C_2 772 889 IPR015151 GO:0006886|GO:0016192|GO:0030131
Phco7g00890 894 Pfam Adaptin N terminal region 82 598 IPR002553 GO:0006886|GO:0016192|GO:0030117
Phco7g00890 894 MobiDBLite consensus disorder prediction 44 88 - -
Phco7g00890 894 MobiDBLite consensus disorder prediction 59 77 - -
Phco7g00890 894 MobiDBLite consensus disorder prediction 688 702 - -
Phco7g00890 894 FunFam Beta-adaptin-like protein A 60 655 - -
Phco7g00890 894 Pfam Beta2-adaptin appendage, C-terminal sub-domain 775 888 IPR015151 GO:0006886|GO:0016192|GO:0030131
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00890 Phco-Chr7 7112436 7121721 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00890 7 7112436 7121721 Phco7g00890 7 7112436 7121721 ECH