Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00870 ATGTCCATGGATCCTCCCAAGAAACCTAACAAGATCAGGGAAATAGTGAGGCTTCAACAGATTCTTAAGAAATGGAGAAGGGTTGCAAACTCTTCAAAAACAAGTGGAAGCATCAAATTTCTGAAAAGAACACTTTCTCTGTCTGAACGTGAGGGAGGAGGATCGAGCAGTGTGGTTCCCAAGGGCTACGTTGCTGTTTGTGTTGGCGTTGAGCTTAGCAGGTTCGTTATACCAACCGAGTATTTGGGTCACCAAGCCTTTCACATGTTACTCAGAGAAGCTGAGGAAGAGTTTGGGTTTGAGCAAACTGGGGTTCTGAGAATTCCTTGTGAAGTGTCGGTGTTCGAGAGTATCTTGAAGATGGTGGAGAGAAAGGACAAGTTTTTCACTCAGAAATGCAGATTTAGCATTGAGAAAATGATGGGATACTGTTCCTCCAACCACCTTGCTTATTCTCATCAACCTCAAAGTCCAATGTGCAGATAG 486 0.4383 MSMDPPKKPNKIREIVRLQQILKKWRRVANSSKTSGSIKFLKRTLSLSEREGGGSSSVVPKGYVAVCVGVELSRFVIPTEYLGHQAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESILKMVERKDKFFTQKCRFSIEKMMGYCSSNHLAYSHQPQSPMCR 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00870 161 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 118 IPR003676 GO:0009733
Phco7g00870 161 Pfam Auxin responsive protein 23 122 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00870 Phco-Chr7 6910329 6910814 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00870 7 6910329 6910814 Phco7g00870 7 6910329 6910814 ECH
Phco7g00870 7 6910329 6910814 Phco2g00884 2 10685796 10686398 PCT