Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00866 ATGAAATATTTGGAAGCGTGTAAAATTTTTAAAGCTTTATCATGGCACTCTCAACACTTTCTTCTTCTTCATTTTCTTCCTCTCTTCTTGCTGCTTCGCTGTTGTATCATGGATCAGAAAGTCGATCTCACCGCTCCCCATTCCATGGGAACCACTATCATCGGCGTTACTTACAACGGTGGTGTTGTTCTAGGAGCCGATTCTCGAACCAGCACCGGAGTGTATGTTGCCAACCGGGCGTCAGACAAAATTACGCAGCTCACTGATAATGTCTATGTCTGTCGTTCTGGATCGGCTGCAGATTCTCAGGTTGTATCTGACTATGTACGTTACTTCCTCCATCAACACACGATACAACTTGGACAACCTGCAACAGTTAAAGTTGCTGCAAACCTCGTCCGGCTTCTCTCGTATAACAACAAGAATTTCTTAGAGACTGGGTTAATTGTTGGAGGTTGGGATAAATATGAAGGTGGACAAATTTTTGGAGTCCCTCTGGGTGGAACAATAGTACAACAACCTTTTGCTATTGGAGGATCTGGCTCCAGTTACTTGTATGGTTTTTTTGACCAAGCCTGGAAAGAGGGAATGACCAAGGATGAAGCTGAGGATTTAGTTAAAAAGGCAGTTTCGCTCGCTATTGCCCGTGATGGTGCAAGTGGTGGGGTGGTCCGAACAGTCATAATAAACTCAGAGGGAGTGACAAGGAATTTCTACCCTGGCGACCAACTTCCACTATGGCATGAGGAAATGGAGCCTCATAACTCTTTGCTTGACATTCTTGGTACCCCAGAGCCGATGAGCATGTGA 810 0.4506 MKYLEACKIFKALSWHSQHFLLLHFLPLFLLLRCCIMDQKVDLTAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLETGLIVGGWDKYEGGQIFGVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWKEGMTKDEAEDLVKKAVSLAIARDGASGGVVRTVIINSEGVTRNFYPGDQLPLWHEEMEPHNSLLDILGTPEPMSM 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00866 269 ProSiteProfiles Proteasome beta-type subunit profile. 50 229 IPR023333 -
Phco7g00866 269 FunFam Proteasome subunit beta 51 250 - -
Phco7g00866 269 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 51 254 IPR029055 -
Phco7g00866 269 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 33 242 IPR029055 -
Phco7g00866 269 PANTHER METALLOPROTEASE TLDD 44 245 IPR023333 -
Phco7g00866 269 CDD proteasome_beta_type_6 51 238 - -
Phco7g00866 269 PRINTS Proteasome component signature 190 201 IPR000243 GO:0004298|GO:0005839|GO:0051603
Phco7g00866 269 PRINTS Proteasome component signature 58 73 IPR000243 GO:0004298|GO:0005839|GO:0051603
Phco7g00866 269 PRINTS Proteasome component signature 179 190 IPR000243 GO:0004298|GO:0005839|GO:0051603
Phco7g00866 269 PRINTS Proteasome component signature 215 226 IPR000243 GO:0004298|GO:0005839|GO:0051603
Phco7g00866 269 Pfam Proteasome subunit 49 229 IPR001353 GO:0005839|GO:0051603
Phco7g00866 269 ProSitePatterns Proteasome beta-type subunits signature. 54 101 IPR016050 GO:0005839|GO:0051603
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00866 Phco-Chr7 6889567 6897527 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00866 7 6889567 6897527 Phco7g00866 7 6889567 6897527 ECH