Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00861 ATGATCTCTTCTCTGTCCCAACGCCCTGTATCATCTCCTTTCGTCTTGGAGACTCAACCTCTTCCTCCTTCTTCCCATCCACTTGCTGATCCTCTTCAGCTGCAATTGCAAGATATCAAGAAAGCTAAACAAAAGAGAGGACATCTGTTTTATCGAGCTCCTATGGCAGGGTTAAATTTTGAAGCTACATATACTGACAACCATGATATTCTGAAGATATTTGAAGCTGAAGGTGTTGAGTTCCTTTTATCTTCTGAAGGGAAGGTACCTGTGTCAGAATGCAGTGGGAAAGTCATCTGCCTATTTTTCAGTGCAAACTGGTGCAGGCCTTGCAGAGCTTTCACTCCCCATCTTCTTGAACTTTATGAAACACTGAGAAAGAGGGGAATAAATATAGAGATCATCTTCATCTCCTTTGACCGTGATGAGGATGGATTTAAAGAACACTTCAAGAGCATGACATGGCTAGCTGTCCCATTTGATGTAAATTTGCACAGAAGACTGATTGACAGATACAGAGTTGATCGAATCCCATCATTTGTTCCATTGTGTTCAGATGCCATAACTGTTAAAGAAGACTTGATTGGCTGCATCGAGGATTATGGTGCTGATGCATTTCCTTTCACTAGGAAGAGACACGAGGAATTGAAAGCCATGGATGAAAGGAAGCGTGAGGAAGCAAACTTGGAAGAATTATTGGGACATGAAGGACGCGACTTTCTCATCTCTGGAGATGATAGAAAGGTGCCCATATGTGAAGTAATTGGTAAAACCATAGGCCTGTATTTTTGTGCCTACTGGTCTCCTCCTTGCTGTGCCTTCACTGTTCAACTTACAGATGCATACAACGAACTCAAGGCTGCAAAAGGAGACTGTTTTGAGATTGTTTTAATATCAACAGATAGGGACCTTGTTGAATTCAATATCAACAAAAGTAGTATGCCTTGGCTTGCTGTTCCATATGAGGATAGGACAAGGCATGACCTTAGAAGAATCTTTGATATAAAGGGCATTCCTGCTTTGGTTCTCATTGGACCAGATGGCAAAGTAATTAGTGGGAATGGCAAGTTTATGGTCTCTTCATATGGTGCAGAAGCTTTTCCATTTACCGAATCACGGATAAGAGACCTAGAAGCAGCTCTGAGAAAGGAAGGAGAGGCTTTGCCACAGCAGGCTGAGGATGTCAAGCATGAACATGTGCTGAAATTGGATATGGCCAAAGCATATGTATGTGATTCTTGTAGAAAGCAAGGGAAGTTCTGGACATTCTCTTGTGATGTCTGTGACTATGACCTACACCCAAGTTGTCTTGAAAAGGCCAATTAG 1326 0.4208 MISSLSQRPVSSPFVLETQPLPPSSHPLADPLQLQLQDIKKAKQKRGHLFYRAPMAGLNFEATYTDNHDILKIFEAEGVEFLLSSEGKVPVSECSGKVICLFFSANWCRPCRAFTPHLLELYETLRKRGINIEIIFISFDRDEDGFKEHFKSMTWLAVPFDVNLHRRLIDRYRVDRIPSFVPLCSDAITVKEDLIGCIEDYGADAFPFTRKRHEELKAMDERKREEANLEELLGHEGRDFLISGDDRKVPICEVIGKTIGLYFCAYWSPPCCAFTVQLTDAYNELKAAKGDCFEIVLISTDRDLVEFNINKSSMPWLAVPYEDRTRHDLRRIFDIKGIPALVLIGPDGKVISGNGKFMVSSYGAEAFPFTESRIRDLEAALRKEGEALPQQAEDVKHEHVLKLDMAKAYVCDSCRKQGKFWTFSCDVCDYDLHPSCLEKAN 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00861 441 CDD TryX_like_TryX_NRX 239 369 IPR045870 GO:0004791
Phco7g00861 441 Pfam Thioredoxin-like 256 350 IPR012336 -
Phco7g00861 441 Pfam Thioredoxin-like 96 181 IPR012336 -
Phco7g00861 441 SUPERFAMILY Cysteine-rich domain 392 437 IPR046349 -
Phco7g00861 441 ProSiteProfiles Thioredoxin domain profile. 70 224 IPR013766 -
Phco7g00861 441 ProSiteProfiles Thioredoxin domain profile. 231 379 IPR013766 -
Phco7g00861 441 Coils Coil 210 230 - -
Phco7g00861 441 Pfam C1 domain 396 436 IPR004146 -
Phco7g00861 441 Gene3D Glutaredoxin 74 212 - -
Phco7g00861 441 SUPERFAMILY Thioredoxin-like 245 351 IPR036249 -
Phco7g00861 441 PANTHER THIOREDOXIN 61 389 - -
Phco7g00861 441 Gene3D Glutaredoxin 234 371 - -
Phco7g00861 441 SUPERFAMILY Thioredoxin-like 85 186 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00861 Phco-Chr7 6823077 6826163 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00861 7 6823077 6826163 Phco7g00861 7 6823077 6826163 ECH