Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00827 ATGCCCAGTGCAGATAACAATTTGCTCCAACCTGGAAGAATAGCAGCTTCTTCTACAAAACCCTACCAAAACCCTCTTCCACCACTCTCTGAACATACACATACACCATGTTCGAAATCGCTTGACCTCAGTATATATATCGCCCCAAACTCAACCAAGTTATCGGTGCTAGAGAGAGTTGTATCAGCGAAAATGCCTCTCGGAGAAAGGTCAGGCGATAAGAGCGAGTCTCGCTACTGTGGTGTGGAGACCGATTTCAACGATGACATGCCACAAGTCCTCCACTTCAACCTCTATACTGGAAGCTTCGATTTCGTTGTTGCTCCTCTGATGGATCCTTCTTATCGACCGAGTTTAGCACAAAAGGATGGTTTGGGTTCTGGTGTTCTGCCATTTGCTGGTTCAGATTTGGTCTTGAGTCCATCCCAATGGAGTAGTCATGTTGTGGGAAAAATTAGCTCATGGATAGACCTGGATTCAGAGGATGAAACCCTCAGGATAGATTCTGAAACTACACTTAAACAAGAAATTGCTTGGGCTTCTCATCTCTCTTTACAGGCCTGCCTGCTTCCTGCTCCCAAGGGAACTTCTTGTGCTAATTATGCTAGATGTGTAAATCAAATCTTACAGGGTACAAATAATATTCAGTTGTGGCTTAGGATTCCATTGGTTAAGCCTGATGTTGACTCTATTGATGCAAAGTCTGTTACTTTGGATGACTCTTGGGAATCTTGGAATTCATTTCGTCTACTGTGCGAGCATCATGGTCAACTGTCAGTTGCACTTGATATTCTGAGTACTCTTCCTTCCACAAATTCACTTGGACGTTGGTTTGGGGAGCCTGTTAGAGCAGCTATATTAAATACCGATTGCTTCCTAACTAATTCTCATGGCTGTCCATGCCTCTCCAAGCGTCACCAGATGTTAATTTCTGGTTTTTTTAACCATTCTATTCAGATTATTATATCTGGAAATTCTGTTCATCCAAAAGCAAGTATGGATGCAAATAATAATTCTGATAAAGATTCTCAGAGACATCCCTTGCGGCCCTATCTGGACTATGTTGGATATCTATACCAAAGAATGGATCCTCTTCCTGAGCAAGAACGTTTTGAGCTTGGTTACAGGGATTTTTTACAGTCACCCTTGCAACCTTTGATGGATAATTTAGAAGCTCAGACTTATGAGACTTTTGAGAAAGATGCAGTGAAATACATTCAGTACCAAAGAGCAGTTAGTAAAGCATTATTGGACAGGGTTCCTGATGAAGAGGCATCTGCTAAAACCATTGTATTGATGGTTGTTGGTGCAGGGCGTGGGCCTCTTGTGCGGGCATCATTGCAGGCTGCTGAAGAAACTGGGCGGAGGCTCAAAGTTTATGCTGTTGAAAAGAATCCAAATGCAGTTGTTACCCTGCATGCATTGGTCAAGTTAGAAGGATGGGAGGACACTGTCACCATAGTCTCGAGTGACATGCGTCATTGGAATGCCCCTGAAAAAGCTGACATATTGGTTAGTGAATTGCTAGGTTCTTTTGGCGACAATGAACTTTCTCCAGAATGCCTTGATGGAGCCCAAAGGTTTCTGCAGGAAGATGGAATTTCCATACCATCTTCGTATACAAGTTTCCTCCAACCAGTGACAGCTTCGAAGTTGTATAATGATGTTAAGGCGCATAAAGATCTTGTACATTTTGAAACTGCTTATGTCGTGAAACTACACAATGTAGCCAGACTTGCACCATCTCAACCTGTTTTTACATTTACTCATCCAAAACGCTCTGAACATGAAAGCAATCAGCGTTTTAAAAAGTTGAATTTTGTGATTCCTAGTGAAACTGGGTCTGCAATGGTACATGGATTTGCTGGTTACTTTGACGCAACACTTTACAAGGATGTGCATCTTGGAATTGAACCTTCAACAGCAACACCAAACATGTTTAGTTGGTTTGCAATATTTTTCCCATTAAGGGCACCTATTTGTGTAGGTCCTGGTTCTACTCTTGAAGTTCATTTTTGGCGCTGTTGTGGTTCTACCAAGGTTTGGTATGAGTGGTGTGTTGCTTCTCCTTCGCAGTCCCCTATTCACAATAGTAATGGACGTTCATACTGGGTGGGGCTTTAG 2124 0.4247 MPSADNNLLQPGRIAASSTKPYQNPLPPLSEHTHTPCSKSLDLSIYIAPNSTKLSVLERVVSAKMPLGERSGDKSESRYCGVETDFNDDMPQVLHFNLYTGSFDFVVAPLMDPSYRPSLAQKDGLGSGVLPFAGSDLVLSPSQWSSHVVGKISSWIDLDSEDETLRIDSETTLKQEIAWASHLSLQACLLPAPKGTSCANYARCVNQILQGTNNIQLWLRIPLVKPDVDSIDAKSVTLDDSWESWNSFRLLCEHHGQLSVALDILSTLPSTNSLGRWFGEPVRAAILNTDCFLTNSHGCPCLSKRHQMLISGFFNHSIQIIISGNSVHPKASMDANNNSDKDSQRHPLRPYLDYVGYLYQRMDPLPEQERFELGYRDFLQSPLQPLMDNLEAQTYETFEKDAVKYIQYQRAVSKALLDRVPDEEASAKTIVLMVVGAGRGPLVRASLQAAEETGRRLKVYAVEKNPNAVVTLHALVKLEGWEDTVTIVSSDMRHWNAPEKADILVSELLGSFGDNELSPECLDGAQRFLQEDGISIPSSYTSFLQPVTASKLYNDVKAHKDLVHFETAYVVKLHNVARLAPSQPVFTFTHPKRSEHESNQRFKKLNFVIPSETGSAMVHGFAGYFDATLYKDVHLGIEPSTATPNMFSWFAIFFPLRAPICVGPGSTLEVHFWRCCGSTKVWYEWCVASPSQSPIHNSNGRSYWVGL 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00827 707 Gene3D Vaccinia Virus protein VP39 371 538 IPR029063 -
Phco7g00827 707 Gene3D - 539 707 - -
Phco7g00827 707 FunFam Protein arginine N-methyltransferase 5 371 538 - -
Phco7g00827 707 Pfam PRMT5 arginine-N-methyltransferase 367 536 IPR035075 -
Phco7g00827 707 PIRSF PRMT5 67 707 IPR007857 GO:0006479|GO:0008168|GO:0035246
Phco7g00827 707 FunFam Protein arginine N-methyltransferase 5 539 707 - -
Phco7g00827 707 Pfam PRMT5 oligomerisation domain 539 705 IPR035248 -
Phco7g00827 707 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 379 685 IPR025799 GO:0016274|GO:0018216
Phco7g00827 707 FunFam Protein arginine N-methyltransferase 78 368 - -
Phco7g00827 707 Pfam PRMT5 TIM barrel domain 103 361 IPR035247 -
Phco7g00827 707 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 394 706 IPR029063 -
Phco7g00827 707 Gene3D - 78 368 - -
Phco7g00827 707 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 5 72 707 IPR025799 GO:0016274|GO:0018216
Phco7g00827 707 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00827 Phco-Chr7 6505009 6515961 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00827 7 6505009 6515961 Phco7g00827 7 6505009 6515961 ECH