Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00820 ATGTCGATGTGGTCTCTAGGTAGAAGATGCTCAAGTAGCGAAATGGCCTCGGTTTCAATTGCCATTTTTCCAGCATTTGGCAGCCCCATCTTAAATATAGAAGGTTACTCCAATCTAAGAAAATACGTAATTGCTCCCTATGACCGTAGATATCAATTGTGGGAAACGTTCCTAGTGGCTTTGGTAGTGTACTCTGCATGGGCATCTCCGTTCAAGCTAGCTTTCAGAGAACTGTTAGTTGGGTCGTTGTTGAGCGTTGATCTTCTTGTTGATGCCTTCTTTGCAGTTGATATAATCCTTACTTTCTTTGTGGCTTACTTGGATACATCAACTTATCTCCTCGTCGACGATTATAAGAAGATAGCTCTCAGGTACGTCAAAAAGTTGCACTTCACCATGGATCTAGCCTCCACTCTGCCAATTGAGCAGATATATCAAATTCTGACGGGCAAGCCAACCAAAAGCGAGGTATTTGGTTTCCTAATTATGCTAAGACTCTGGCGACTGAGGCGTGTTAGCGAACTCTTCGCAAGGCTAGAAAAAGACATACGAATAAACTATTGGGCAACGAGATTTTGCAAAGTTATATGCGTTACGCTATTTGCAGCGCACTTCGCAGGCTGCATGTTTTATTGGTTGGCTGTCCAGCACAAAACACCGAACAACACATGGATAGGGAACAAAACACAGGATTTTCATGAATTGGGCATCGGGTTGGGTTACACTTATTCTGTGTACTGGTCTGTTGCAACCCTTACCACTGTTGGATATGGAGATTTTTATGCAGTGAATTTAACGGAGAAGCTATTCTGTATTTTATACACGCTCTTTAACATCGGCCTCGGTGCATATATAATTGGAAACATGACAACTTTGTTGGTTCATATCTCTGTCCGAACCTTTGCCGTGAGGGATGTCTTCGACAAAATATTACAATATGCAAACAAAAATAGACTCCCAGGAGGATTAAAAGAGCAAATATTGGCACACATGCAATTGAAGTTCAAGACTGCAGAGTTGCAGCAAGAAGTGCTGCAAGACCTACCAAAAACTATAAGATCCTGTATTGCTCAGCATCTTTTCAAAAACACTGTTGAAACAGCATATTTATTTAAAGGAGTTTCTGATTATTTTATCACCCAGCTGGTGTCAGAAACGAAAGCAGAATACTACCCATCTAAGGTTGACATTATCTTGCAAAATGAGATGCCAAAATATTTTTACATCTTGGTATCTGGGTCACTGGATGTGTTGATATACAATACTGGGTCCGAACAGTGTTTATTCGAACTTGAATCTGGAGACATGGCAGGAGAAATAGGCGTGATGTTTAATATTCCACAACCCTTTACAGTGAGAAGTAGAGGGCTCTCCCAGGTCATACGAATCAATCATCATCACTTCAAGCAGATGGTGCAACCATTTAGTGACGATGGGAAGGCAATCATGTACAACTTTATTCAGTATTTGAAGGGCCTCAAAGGCAAGGTGCTAGAAGAAATATCGTGTGTAACAGAATTGCTGGGTGACCTTGAGCATCTGAGGCAAAATGAGGGTACACTCGATGAAGATTCCAGATATCAAGATCCAAATAAAGAAGGTAAAACAGGAAATTCCAAACCACTGTCAAGCCCAGTCCCCGTTAGAGTTAAAATCCACGGACACCATCCCAATGAAAACAAAATGGGAAATGGAACAACGCCAAAGCTCATACTTCTCCCAAATTCGGTTGAAGATATTTTCAGAGTTGCAGAGAGAAAATTCGGAAAAAGAGGAAGCAAAATTGTCATGGCTGACGGCTCAGAAGTAGAACAATTAAACGCGCTAAGGGAGAATGATGAGTTATATATCCTTTAA 1857 0.4109 MSMWSLGRRCSSSEMASVSIAIFPAFGSPILNIEGYSNLRKYVIAPYDRRYQLWETFLVALVVYSAWASPFKLAFRELLVGSLLSVDLLVDAFFAVDIILTFFVAYLDTSTYLLVDDYKKIALRYVKKLHFTMDLASTLPIEQIYQILTGKPTKSEVFGFLIMLRLWRLRRVSELFARLEKDIRINYWATRFCKVICVTLFAAHFAGCMFYWLAVQHKTPNNTWIGNKTQDFHELGIGLGYTYSVYWSVATLTTVGYGDFYAVNLTEKLFCILYTLFNIGLGAYIIGNMTTLLVHISVRTFAVRDVFDKILQYANKNRLPGGLKEQILAHMQLKFKTAELQQEVLQDLPKTIRSCIAQHLFKNTVETAYLFKGVSDYFITQLVSETKAEYYPSKVDIILQNEMPKYFYILVSGSLDVLIYNTGSEQCLFELESGDMAGEIGVMFNIPQPFTVRSRGLSQVIRINHHHFKQMVQPFSDDGKAIMYNFIQYLKGLKGKVLEEISCVTELLGDLEHLRQNEGTLDEDSRYQDPNKEGKTGNSKPLSSPVPVRVKIHGHHPNENKMGNGTTPKLILLPNSVEDIFRVAERKFGKRGSKIVMADGSEVEQLNALRENDELYIL 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00820 618 Gene3D - 52 296 - -
Phco7g00820 618 MobiDBLite consensus disorder prediction 519 547 - -
Phco7g00820 618 SMART cnmp_10 370 487 IPR000595 -
Phco7g00820 618 MobiDBLite consensus disorder prediction 519 533 - -
Phco7g00820 618 Pfam Ion transport protein 52 299 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Phco7g00820 618 ProSiteProfiles KHA domain profile. 549 618 IPR021789 -
Phco7g00820 618 ProSiteProfiles cAMP/cGMP binding motif profile. 370 489 IPR000595 -
Phco7g00820 618 CDD CAP_ED 370 483 IPR000595 -
Phco7g00820 618 PRINTS EAG/ELK/ERG potassium channel family signature 98 107 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phco7g00820 618 PRINTS EAG/ELK/ERG potassium channel family signature 87 97 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phco7g00820 618 PRINTS EAG/ELK/ERG potassium channel family signature 241 258 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phco7g00820 618 PRINTS EAG/ELK/ERG potassium channel family signature 267 278 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phco7g00820 618 PRINTS EAG/ELK/ERG potassium channel family signature 285 294 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phco7g00820 618 SUPERFAMILY cAMP-binding domain-like 301 490 IPR018490 -
Phco7g00820 618 SUPERFAMILY Voltage-gated potassium channels 46 294 - -
Phco7g00820 618 Pfam Cyclic nucleotide-binding domain 391 473 IPR000595 -
Phco7g00820 618 Gene3D Jelly Rolls 341 502 IPR014710 -
Phco7g00820 618 Pfam KHA, dimerisation domain of potassium ion channel 549 617 IPR021789 -
Phco7g00820 618 PANTHER POTASSIUM CHANNEL AKT1 16 501 IPR045319 GO:0005249|GO:0006813
Phco7g00820 618 FunFam Potassium channel KAT2 358 494 - -
Phco7g00820 618 FunFam Potassium channel KAT3 53 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00820 Phco-Chr7 6435023 6441801 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00820 7 6435023 6441801 Phco7g00820 7 6435023 6441801 ECH