Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00816 ATGGGAGTGGTGGCAGTGTTGCACTCTGAGTCTCTGCAGCTTGACTGCAAGGACACGAAGCATGTGACCGAGAAAGATGTGTATAATCATCTTCCATCAAACGAAGAGCACATACATGGAGAAGAATCAAGTCAAAAGATCAATAATTTGCGTGAGAGAGGATATATGGAATATGGATGTCAACATTACCGGAGAAGATGCCGTATTAGGGCCCCCTGTTGCAATGAAATTTTTAATTGCCGCCATTGTCACAATGAGGCAAAAAATAATATCAACATTGATCAGAAGCACAGACATGATGTTCCCCGCCATCAAGTTAAACAGGTTATATGTTCACTTTGTGGGACCGAACAAGAGGTTCAGCAAAACTGTATTAACTGTGGTGTTTGTATGGGCAAGTACTTCTGTGGGACGTGTAAGCTCTTTGATGATGATGTATCTAAGAAGCAATATCATTGCACTGGCTGTGGAATTTGCAGAACTGGAGGATGTGAAAATGTCTTCCACTGCTTCAAATGTGGTTGTTGCTACCCAACTCAGATGAAAAACAGTCACCCTTGTGTGGAAGGAGCAATGCATCATGATTGCCCCATTTGTTTCGAGTACTTGTTTGAATCTGTGAATGATGTCCTTGTTTTGCCTTGCGGACATACAATACATAAGAGCTGCCTGAATGAAATGAGGGAACATTTCCAGTATGCATGCCCTCTCTGCTCCAAGTCAGTTTGTGACATGTCAATCATTTGGGAGAAGTTTGACTTGGAGATTGCTGCTACACCAATGCCTGAAGCATATCGAAACAAAATGATTTGGATCCTTTGTAATGATTGCACTAAAACTTCTCACGTCCAGTTCCATCTTGTTGCTCAAAAGTGCTTGAACTGCAAATCCTACAACACACGACAGATAAGAGGCTGA 918 0.4205 MGVVAVLHSESLQLDCKDTKHVTEKDVYNHLPSNEEHIHGEESSQKINNLRERGYMEYGCQHYRRRCRIRAPCCNEIFNCRHCHNEAKNNINIDQKHRHDVPRHQVKQVICSLCGTEQEVQQNCINCGVCMGKYFCGTCKLFDDDVSKKQYHCTGCGICRTGGCENVFHCFKCGCCYPTQMKNSHPCVEGAMHHDCPICFEYLFESVNDVLVLPCGHTIHKSCLNEMREHFQYACPLCSKSVCDMSIIWEKFDLEIAATPMPEAYRNKMIWILCNDCTKTSHVQFHLVAQKCLNCKSYNTRQIRG 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00816 305 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 190 241 IPR013083 -
Phco7g00816 305 SUPERFAMILY RING/U-box 195 247 - -
Phco7g00816 305 ProSiteProfiles Zinc finger CHY-type profile. 53 129 IPR008913 GO:0008270
Phco7g00816 305 Pfam Ring finger domain 195 238 IPR001841 -
Phco7g00816 305 ProSiteProfiles Zinc finger CTCHY-type profile. 131 195 IPR017921 -
Phco7g00816 305 Pfam Zinc-ribbon 243 301 IPR039512 -
Phco7g00816 305 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 33 304 - -
Phco7g00816 305 ProSiteProfiles Zinc finger RING-type profile. 196 239 IPR001841 -
Phco7g00816 305 SUPERFAMILY Zinc hairpin stack 132 189 IPR037275 -
Phco7g00816 305 SMART ring_2 196 238 IPR001841 -
Phco7g00816 305 Pfam CHY zinc finger 60 141 IPR008913 GO:0008270
Phco7g00816 305 Gene3D - 267 305 - -
Phco7g00816 305 SUPERFAMILY CHY zinc finger-like 57 131 IPR037274 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00816 Phco-Chr7 6409138 6412356 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00816 7 6409138 6412356 Phco7g00816 7 6409138 6412356 ECH