LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco7g00815	ATGGCTAGTGGCAATTCTGAAATTTCCGAAATTTGCAGGGTGCAGGTCGAATTGATCGGGTACCTTAAGCAAAAGCCTTATTCGTCTGTGGTTGGTCTTTGGTGTCGCTACTCTGTCGAAGAGTTCATGTTTCACTCGCGGAGTTCCACTTCTTGTTTATCCCGAAAGCATTGCATCTACTTCGTTGACGCGAATGCGACCAAGATGCCGAGAATGGAGGACATTCTGAATCTTCCTGTGCAGGATCCTCGTTGTACCGAGTTATCTGCTGCTCACATAAATTGGGTTAAATTGGAAGGTGGTCGCCAAGGTGGTGACGATATTGCTCTCATTCCTTTTGCCAGAGTTGATGATTTTGTCAAAGGGGAATCTTCCAATCCCGAATGTCCTGCGAGTTTTCGTATAGAATCAAGAAGGAAGAGAGCTGAAGGAAGCATTGCCAAGCCAAGGGTTGATGGTTACCTTGAATACACTCTATACTGGTGTTCTTATGGTCCCGAAGACTACAGAGAGAGTGATTCAGGTGTAGGGGATGGTATGAGCACCAAGCCTGCTTCAGGGAAGGGGAGCAGGCCAGGGAGGCGTCACATGATGAGGGGTTGCCTTTGTCATTTCACTATTAAAAGACTGTACACCAGGCCCCTCCTTGCGCTAATCATATATAACCAAAGAAGGCATGTAGATAAATCAGGGGCACCATGTCATGGATTGCTTGACAGGGATGCCGTGGGGACGAGAGCTATGTATGCTCCTCGAATTTCTGATGAGTTACGCCAGAAAGTGATGTCTATGCTTTATGCTGGAATGTCTTTGGACAAGATAATACAACATCATACAGAGGAGATGCAGAAGCAAGGTGGCCCCCAAAACCGCGATGGTTTTCTCACTCGAAATGATGTGCGTAACATGGAAAGGACTATTCGTAATTCTTCACATGAGCTACACGAAAATGATGAATGCAGTGTAAAGATGTGGGTTCAGAGGCATCAGAAGCATGTTTTCTATTTTCAAGATAACTCAGCTTCAGAACCATTTGTGTTGGGTATACAGACAGATTGGCAGCTGCAACAAATGCTCCGTTATGGAAATAATAGTTTAATTTCCTTTCATTCAGGTTTTGGCTTGAAGCAGCTCAAGTATCCTGTATGTTCTTTACTTGTTTTCAATTCATCTCAAAATGCAATTCCGGTTGCCTGGATCATCGCCTCATCTTTTGTTGGTAAATCTTTTCATAAATGGATGGTATTGCTATCTGAAAGATTACAAACCAAGGATCCCGGATGGAGGCCTGGTGCTATTTTGTTGGATGATCCATCTTTGCACTTTTCTATCATAAGAGAGGCTTTCAAGTGTCGTATCCTATCATGTGCCTGGCATGTTCGCCGTACTTTGATTAAAAAACTTCTCAAAAAATGCTGCAACTTTAAGGTGCAACGGGAGATGTTTATGCATTTGGGATGGATTCTGTACTGTACAAAATGTGGGCCAAATGCTGCTATGGATTCTGTTGAAGAGTTTATGCAAATTTTTGTTGACCAGTGTGCCTTTATGGACTATTTCAAGAACCATTGGCAAGCTAGTCTAGATATGTGGATTGATGCCATAAAGTCATTCCCAGCGACAACCCCTGAACCCCATGCTGCAACAGAATCCTATCACCTAAAATTAAAATCTATGCTTCTGAAGGAGAATTATGGTAATTTTTGGCTAAGAGTTGACTGGTTAATCCATGCTTTAACTACTGAATTTCACTCGTTATACTGGTTGGATCAGTACAGTTTAGAGACAGGGTATTTTGAGAATCTACAGGACAATTCTTTCACCTCTAATGCTTGGCATCATGCTCTTCATATTCCTGATGTTGACGTGATGCTGGATGAGCAAAATCTCCATCTTGCCAAAGTTTTATCCCAGACTGACAGAAGCTTGGTATATACAGTTTGGAATCCTGGTTCAGAATTTTCACTTTGTGATTGTTCCTGGTCTAGGCTGGGAAACCTCTGTAAACATGTCATCAAGGTGGCGAATTTCTGTAGACATCGGCAGGTTTCAAAACCATCATTGTCTGCTCAAGTTTATAAACAGGCTTTGCTCAGCCTTTTCCAAAATCCTCCTGATGATCCTTTAGTTCTAGACCATACCATGCCACATGTGGCCCGTTTGCAACAAGATATTAAGGCCTTGGAAGACTTGTCCAACAGTGGATTGCTCCAGCCTATATCTCCTGATTTAAGTTCTCAAATGGCTGAGAATCCTCTGCTTTTTCAACGCATCCATGTCCAGTTCATGAAACCAGAAGACTTTTTTGCAGAAGTATCTCTCTTGAAATGCTACATATGGTCCAAGCCTTTATTCGCTAAATATTTGTCAGATGCTTTCACTAATTTGGGGAGGATGAACTCCAGATTGCCCAAAGAAATGAAAAGGAAGGAACAAAACAGTCAGGTTCTTGTTGAGGTTCTTAGCATGCATTCAGACGTTAAGGTGTTTTGCAGATCAAACCATCATGCTGTCAGTGAGTCCTTTGACTTCTGTGCTACAATCGCCAACTCTGTGGTGGTTGCCTGGCACCTGCATGGCGTGATTGTTGAAGTAGATTTTCATGTGGTTCCCAGGCTCCCCACAATTTCGGTTATGGTCTCTTGGTTGAAGATACACAGAGGGGTAGTCTCGGAAGTTCAGAAGTCTCTCGAAGGACTCAATTGTCCCAGACCTATAAATTGGAATGAGATTCTTCATGTCCCTCCTCTGCATCGTTTTGTGCTGGGTAAGGGGAGAGATACCAATCTCTGCTTCCGATTTGGGACTCCACTTAGTATCTATAGTTTTGAATTGGATCGCCCACCTCTCTCCGGCTCCAAAGTCATCAGGCTTACTGCCTGCTTCTAG	2889	0.432	MASGNSEISEICRVQVELIGYLKQKPYSSVVGLWCRYSVEEFMFHSRSSTSCLSRKHCIYFVDANATKMPRMEDILNLPVQDPRCTELSAAHINWVKLEGGRQGGDDIALIPFARVDDFVKGESSNPECPASFRIESRRKRAEGSIAKPRVDGYLEYTLYWCSYGPEDYRESDSGVGDGMSTKPASGKGSRPGRRHMMRGCLCHFTIKRLYTRPLLALIIYNQRRHVDKSGAPCHGLLDRDAVGTRAMYAPRISDELRQKVMSMLYAGMSLDKIIQHHTEEMQKQGGPQNRDGFLTRNDVRNMERTIRNSSHELHENDECSVKMWVQRHQKHVFYFQDNSASEPFVLGIQTDWQLQQMLRYGNNSLISFHSGFGLKQLKYPVCSLLVFNSSQNAIPVAWIIASSFVGKSFHKWMVLLSERLQTKDPGWRPGAILLDDPSLHFSIIREAFKCRILSCAWHVRRTLIKKLLKKCCNFKVQREMFMHLGWILYCTKCGPNAAMDSVEEFMQIFVDQCAFMDYFKNHWQASLDMWIDAIKSFPATTPEPHAATESYHLKLKSMLLKENYGNFWLRVDWLIHALTTEFHSLYWLDQYSLETGYFENLQDNSFTSNAWHHALHIPDVDVMLDEQNLHLAKVLSQTDRSLVYTVWNPGSEFSLCDCSWSRLGNLCKHVIKVANFCRHRQVSKPSLSAQVYKQALLSLFQNPPDDPLVLDHTMPHVARLQQDIKALEDLSNSGLLQPISPDLSSQMAENPLLFQRIHVQFMKPEDFFAEVSLLKCYIWSKPLFAKYLSDAFTNLGRMNSRLPKEMKRKEQNSQVLVEVLSMHSDVKVFCRSNHHAVSESFDFCATIANSVVVAWHLHGVIVEVDFHVVPRLPTISVMVSWLKIHRGVVSEVQKSLEGLNCPRPINWNEILHVPPLHRFVLGKGRDTNLCFRFGTPLSIYSFELDRPPLSGSKVIRLTACF	962

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco7g00815	962	ProSiteProfiles	Zinc finger SWIM-type profile.	645	679	IPR007527	GO:0008270
	Phco7g00815	962	PANTHER	ZINC ION BINDING PROTEIN	69	759	-	-
	Phco7g00815	962	MobiDBLite	consensus disorder prediction	172	194	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco7g00815	Phco-Chr7	6395181	6409102	Dispersed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phco7g00815	7	6395181	6409102	Phco7g00815	7	6395181	6409102	ECH