Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00812 ATGCACGTGAAAGCGGCACAATCATCGTCCCGGGATCGGACGCATGAATTCCACAGCATCACCGAGAGGTTGAAAAAGTCCAGATCAGGGCCCGCTGGGCCCAGCAGTAGCAGTTCTTCCAGATCGGAGGAACAGCGATCATCGATCGCAAATCAATCGGATTTCAATAGACGAGCCTCCAAAATCGGCTTCGGAATTCACCAAACGTCTCAGAAGCTCTCCAAGCTCGCCAAATTGGCGAAAAGGACTTCGGTTTTTGATGACCCTACCATGGAAATCCAAGAGCTTACTGGTGTTATTAAGCAGGATATCACTGCTTTAAACTCTGCGGTGGTGGATCTTCAGTTGCTATGCAACTCTAGGAATGAGAGTGGAAATGTTTCTGTGGACACAACGAGCCATTCGAGCACCGTGGTGGATGACTTGAAGACGCGGTTGATGAGCGCTACCAAAGAGTTTAAGGATGTTCTCACCATGAGAACTGAGAACATGAAAGTGCATGAGAATAGAAGACAGTTGTTTTCGTCTTCTGCTTCTAAGGATTCGGCAAATCCTTTCATCCGGCAACGGCCTTTGGCTGCTAGGGCAGCAGCTGGTAGTTCTAATGCCCCTGCTCCCTGGGCTAATGAGTCGCCATCTTCATCTCAGGTGTTTCCCAAGAAGCAAATGGACGCGGAGAGTCAACCATTGTTGCAGCAGCAGCAGCAACAGCAGCAGGATGTAGTTCCATTACAAGACAGTTACATGCAAAGCAGAACCGAAGCTCTTCAGAATGTTGAGTCCACTATTCATGAGCTTAGCAGCATTTTTAATCAGCTAGCGACACTTGTTTCCCAACAAGGAGAGATTGCCATCAGGATCGATGAAAACATGGATGATACATTGTCAAACGTAGAGGGAGCACAAGGGGCTTTGTTGAAATATCTGAACAGCATATCTTCTAATCGGTGGTTGATGATCAAAATTTTCTTTGTATTGATATTTTTTCTTATGGTTTTCTTATTTTTTGTGGCATAG 1017 0.4612 MHVKAAQSSSRDRTHEFHSITERLKKSRSGPAGPSSSSSSRSEEQRSSIANQSDFNRRASKIGFGIHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTGVIKQDITALNSAVVDLQLLCNSRNESGNVSVDTTSHSSTVVDDLKTRLMSATKEFKDVLTMRTENMKVHENRRQLFSSSASKDSANPFIRQRPLAARAAAGSSNAPAPWANESPSSSQVFPKKQMDAESQPLLQQQQQQQQDVVPLQDSYMQSRTEALQNVESTIHELSSIFNQLATLVSQQGEIAIRIDENMDDTLSNVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00812 338 MobiDBLite consensus disorder prediction 30 54 - -
Phco7g00812 338 MobiDBLite consensus disorder prediction 1 54 - -
Phco7g00812 338 CDD SNARE_syntaxin5 249 327 - -
Phco7g00812 338 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 6 26 IPR021538 -
Phco7g00812 338 ProSitePatterns Syntaxin / epimorphin family signature. 252 291 IPR006012 GO:0005484|GO:0006886|GO:0016020
Phco7g00812 338 MobiDBLite consensus disorder prediction 204 237 - -
Phco7g00812 338 SUPERFAMILY t-snare proteins 52 301 IPR010989 GO:0016020|GO:0016192
Phco7g00812 338 SMART tSNARE_6 241 308 IPR000727 -
Phco7g00812 338 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 246 308 IPR000727 -
Phco7g00812 338 MobiDBLite consensus disorder prediction 193 237 - -
Phco7g00812 338 Pfam SNARE domain 282 334 IPR000727 -
Phco7g00812 338 Gene3D - 49 301 - -
Phco7g00812 338 PANTHER SYNTAXIN 48 330 IPR045242 -
Phco7g00812 338 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00812 Phco-Chr7 6366802 6373297 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00812 7 6366802 6373297 Phco7g00812 7 6366802 6373297 ECH