Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00806 ATGTGTGCAATACTTTGGAGGTTTTGCAATGGAGATAGTATAATAAAAGTCACTAAGTGGCAATGCTATTCACCTCACTCAATTCCTTGTTTTGTATTTTGGAATCCGGTATTTGTTGCAATAATAGCAATGGAAAAAGAAGAGATGGGTGTGGATTACTATGATGTATTGAAGGTAAACAGAAATGCTACGGAGGACGATTTGAAGAAAGCATACAGAAAGTTGGCCATGAAATGGCACCCTGATAAGAACCCCACCAACAAAAAAGAAGCTGAAGCCAATTTCAAACAGATCTCTGAGGCTTATGAGGTGCTGAGTGACCCTCAGAAAAGGGTGGTTTATGATCACTATGGAGAGGAGGGGTTGAAAGATAGGCCACCTGATGAACCATCAAATGGGTTCAACCCCAGAAATGCAGAGGATATTTTTGCAGAATTCTTTGGAAGTAGCCCTTTTGGATTTGGATCATCGGGGCCAGGGAAGTCCAAGAGATTCCCCTCTGATGGCGGGACAACAACGTTTGGTGGATTTAGTGCAAATGATAATAATTTTCGATCATATAGTACTGGACGGGGGAATGTGCTAAAGAAGCCACTACCTGTGGAATCCAAACTGCCTTGCTCTTTGGAGGAATTGTACTCTGGATCTACAAGGAAAATGAAGATCTCAAGGAACACCGTGGATGCTCACGGATGGACAGTTCCAGAAACAGAGATATTAACCATTGATGTGAAGCCGGGTTGGAAGAAAGGGACAAAGATTACGTTCCCTGAGAAAGGGAATCAACAACCAAATCAACTGGCAGCAGACCTTGTGTTTGTGATTGACGAGAAGCCTCATGATGTGTTCAAGAGAGACGGGAATGACCTTATTGTGAACAAAAGGGTATCATTGGCTGAGGCCATTGGAGGAACCACAATAAACCTCACCACACTTGATGGACGGACTTTAAATGTTCCAGTGAGTGACATTGTGAGTCCTGGTTACGAGATGAATGTTGCAAAAGAAGGGATGCCAATAACAAAGGAGCCTGGTCATAGGGGTGATTTGAGGATCAAATTTGATGTCAGTTTTCCAACAGAGTTGACCCCAGAGCAACGAGCAGGACTCAAGCGAGCACTCACAACTTGA 1131 0.4341 MCAILWRFCNGDSIIKVTKWQCYSPHSIPCFVFWNPVFVAIIAMEKEEMGVDYYDVLKVNRNATEDDLKKAYRKLAMKWHPDKNPTNKKEAEANFKQISEAYEVLSDPQKRVVYDHYGEEGLKDRPPDEPSNGFNPRNAEDIFAEFFGSSPFGFGSSGPGKSKRFPSDGGTTTFGGFSANDNNFRSYSTGRGNVLKKPLPVESKLPCSLEELYSGSTRKMKISRNTVDAHGWTVPETEILTIDVKPGWKKGTKITFPEKGNQQPNQLAADLVFVIDEKPHDVFKRDGNDLIVNKRVSLAEAIGGTTINLTTLDGRTLNVPVSDIVSPGYEMNVAKEGMPITKEPGHRGDLRIKFDVSFPTELTPEQRAGLKRALTT 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00806 376 CDD DnaJ 52 107 IPR001623 -
Phco7g00806 376 SUPERFAMILY Chaperone J-domain 51 156 IPR036869 -
Phco7g00806 376 PRINTS DnaJ domain signature 72 87 IPR001623 -
Phco7g00806 376 PRINTS DnaJ domain signature 54 72 IPR001623 -
Phco7g00806 376 PRINTS DnaJ domain signature 90 110 IPR001623 -
Phco7g00806 376 PRINTS DnaJ domain signature 110 129 IPR001623 -
Phco7g00806 376 Gene3D - 279 376 - -
Phco7g00806 376 MobiDBLite consensus disorder prediction 157 176 - -
Phco7g00806 376 FunFam DNAJ heat shock family protein 279 374 - -
Phco7g00806 376 ProSiteProfiles dnaJ domain profile. 52 118 IPR001623 -
Phco7g00806 376 SUPERFAMILY HSP40/DnaJ peptide-binding domain 201 281 IPR008971 GO:0006457|GO:0051082
Phco7g00806 376 CDD DnaJ_C 201 362 - -
Phco7g00806 376 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 49 374 - -
Phco7g00806 376 FunFam Dnaj homolog subfamily b member 197 278 - -
Phco7g00806 376 Pfam DnaJ domain 52 115 IPR001623 -
Phco7g00806 376 SMART dnaj_3 51 110 IPR001623 -
Phco7g00806 376 Gene3D DnaJ domain 50 157 IPR036869 -
Phco7g00806 376 ProSitePatterns Nt-dnaJ domain signature. 95 114 IPR018253 -
Phco7g00806 376 Gene3D - 200 278 - -
Phco7g00806 376 Pfam DnaJ C terminal domain 201 359 IPR002939 -
Phco7g00806 376 SUPERFAMILY HSP40/DnaJ peptide-binding domain 282 368 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00806 Phco-Chr7 6309010 6312411 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00806 7 6309010 6312411 Phco7g00806 7 6309010 6312411 ECH