Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00805 ATGTCCAACAATCTGGTTTCAGAGCCCGTACCCAGTATGCAAATGGCTCGGTTGGAGCCGATTATGAACAAGATTGATTCGTCAGGGGGACAGATGGAAATGGGGATTTTGGGTCCCGTGTCCAGTGATATTGTGTCACAGCCTATGGGAATCTCAAATGAACATGTTGGGTTATTGAGAGCTGTGCCTGGTGAATCTAGGTCTCAGGGCATGCCCCATTCAAGCATGCAGAGTGGGCGAGTAGAAGAACTAGCGAGTAATCCAGAAAGGCATCAAATTATTTCCTCTAACAGACAGTCCATGCAAATGGGGAGGCTTCCAAATAACGCAGGGCCTCAGCAGCAGCAGCAGCCAACAACTCCCAAGCGCAAGGCCCCACTGGAACTATCATCCAGTAGTTCCTTTAACAAGCGGCTTGCACAAATGGGAAACAGACCTTGGTTACAGCAAGTACCTAATGCATCAAATAGAGGTTCTCCACAGATGCAATCCCTGTCAAATGCCTCCAGAACACAGCATTCGGCACCTTCTAGTAAGAGAAAGACACAGTTGGATAGCACTTCCAGTAAAGCGGGGACACCTCGGTCTGTGAATTCTAAAATTCAGAATACCCAGATAAAGCAGTCCTCCAAGGCTCAAACCGAATCATCTGAAAGTGTTAGGTCCAAGATGAGAGAGTCATTAGCTGCTGCTCTGGCCTTGGTTTCTCAGCAAGGTAAACCTCAGATCCCAAACAATAATACACCAATTGATGATGTTACTAATACTCAAAGTAAAATAGAGAACAACACTCATTGTTCTGGACCAACACCTACATCCATCAATGCTCCACTGGAGCAAGGTATTTCTCAATCAGTTAATTCCTCTCTTGCTGGGGCTGATTCAGTTGGCCGGGTGGAGAGAGATCACATGCAGAGTACATCATTCAAAGAAGATTTTCCAGAAAAATACAAGGACTATGAAGCAGGATCCACTAATGCATCTAACAATGAAAGCATACTGGCTTCCATGCAAGTCTTGAACTGTGATAAGCAAGATTTCCCGTCATGTTACACTTTGACTACTGATGATGTTCCTTTTAGTGACAGTTTCTTTATGAAAGATGATCTTTTGCAGGGAAATGGTCTTTCCTGGGTATTATCTGATATGGTGGACGTGGGAAATCAAAGGGAAAGTCAACCTAATATAACGCAGAGATCAGAACCTGAGGAAACTGGTGGAGGTTGTAGGGAGGAGGTCCCTTTACCTGAACTTTTGGCATCAAAAATAGAAGCAGAACTATTCAAACTGTTTGGAGGTGTGAATAAGAAGTACAAAGAGAAAGGGAGGTCCCTTTTATTTAATTTAAAAGATCGCAATAACCCTGAACTTAGAGAAAGGGTTATGTTTGGTCAAATTCCTCCTGAACAATTATGTTCCATGACTGCAGAGGAACTTGCTTCAAAAGAGCTCTCTCAGTGGCGTATAGCCAAAGCTGAGGAGCTTGCTCAAATGGTGGTTTTACCTAATTCAGATGTTGATTTTAGACGTTTGGTCAAGAAGACTCATAAAGGTGAATTTCAAGTGGAAGTTGAACATGAAGACAATGTATCCGTGGAGGAGGTTTCTGGTGGCACAACTTCAGTGGCTAGAAGCCAAACAGCAATGAAGGATGTGGAAGGCACTTCTTCAAAATCTGACGTGAACATTGATGCCGAAAAGCGCAATTTACAGAAGGATGATACATTTTCCATTACCATTTCGTCAAACGACGGGACTGATCCCATGCAGGGGCTTATGACTGATGATGCATTGAAGGACCCTGATTTTCTTCCGCCAATTGTCTCCCTTGATGAATTCATGGAATCTCTTCATTCTGAGCCACCATTTGAAAATTTACGGCTAGAGTCTGGGAAAGTGGCACCTCCTTTAGACAAGGATGATTCTGGGGTTGGATCTAGATCAAAATCTTCTGATTTAACTCCAAATGAGCAACCTGTTGTCACTCCTGACAAGTTTCAAAGCACATGTGTAAATTCAGATGCTGAAAAGGAGAAAAAGGCTGATGCTGAATCTGGGACCATTTCTTCTGATATGGGATACAGCGGGAGTCAAGCTGACATGAAGTCAACTGACGGTGGAACCAAGGAAAGATCAATTGATGATGTGAAGCCTGCATCCAGCGATACCGAGTTCAAAGGCAATCAGTTTCATGCGGAAGGGAGATATGGTAATGATAATAGGTATTTGAAGGATGCGGTGCCCACTAAGGGTGAATGCCTCTGGGAGGGAATGCTTCAACCAAATATATCTACCACTCAGTCCGTCATAAGCTTCTATAAGAGTGGCGAGAAAACTGCTGCTAAAGACTGGCCTGGGTTTCTTGAGATCAAGGGAAGGGTTCGACTAGATGCATTCGAGAAATTTCTTCAAGATCTTCGATTGTCTAGGAGTCGTGCAATCATGGTTTCGCATTTCCTTTCCAAAGAGTTGGACGAGCAATCAACTCTCCGTGAGGTGGCTGACTCGTATATTTCGGACGAGAGAGTAGGATTTGCCGAGCCTGTGCATGGAGTAGAACTTTACTTTTGCCCACCTCATAAGAAAACAGTTGAAATGCTCAGCAACATACTTCCAAAGGAACAAATTGAGGCAGTTAATTCTATTGATAATGGTCTAATTGGTATTATTGTATGGAGAAAAACTAATTTAACTTCGTCTATATCACCTACCACTGCTACACACCACAAACATAGCTCTAAAAGACAACAATACTTTAGTAGGAGACAGCAAGATATAAATGCGAATGCCAATTCCACCCATAAAGCAGTACCCCATACGGACTTTAAGACCGTAGAGAATGAGAATGATGACGATGATGATGAAGTTCCTCCTGGATTTGGGCCACCAGCTGCCCGAGTTGAGGATGATCTGCCGGAGTTTAATTTCTCCAGCAGTTCGATTCCACCACACTTGGCCCAAAAGCCAAAGGAAGTACCAAATATGGTTACATTACACTCAGTTAACCCAGCCCCACCACCAGCACGCCCTGTAGAACAAATGAGGGAACTTGTATACAAATATGGGCAAAACAAACCAAGTGCACCTTCAGTAAACTGGCAGGATAAATTTGGGGGGACAATTCAACCATGGAATGATGATGATGATGACATACCTGAATGGCAGCCCCAAACCTCCCAGCAGAATCAGTTTCTTCCGCAACAGACAATGCACAACTTTCATCTTCGACCGCACATTTTGAATCAATCATTTCCGGGTTCACAACAACAGCCTATTATGACACCACAATACCTGCAACCCCCCATGAATGTGGCTCATAGCCAAAGAAATTTTGACCCTCAATGGGTTCCTTCTCCTCAGGGTACCATCCTACAGCCAAGAGGTGGACCGCCCTACGGAGCGCCTGCGCAAGGCACTACCTGGCCTCAAAATGTGTCTAGAAGTAGGGGATATTAG 3456 0.4407 MSNNLVSEPVPSMQMARLEPIMNKIDSSGGQMEMGILGPVSSDIVSQPMGISNEHVGLLRAVPGESRSQGMPHSSMQSGRVEELASNPERHQIISSNRQSMQMGRLPNNAGPQQQQQPTTPKRKAPLELSSSSSFNKRLAQMGNRPWLQQVPNASNRGSPQMQSLSNASRTQHSAPSSKRKTQLDSTSSKAGTPRSVNSKIQNTQIKQSSKAQTESSESVRSKMRESLAAALALVSQQGKPQIPNNNTPIDDVTNTQSKIENNTHCSGPTPTSINAPLEQGISQSVNSSLAGADSVGRVERDHMQSTSFKEDFPEKYKDYEAGSTNASNNESILASMQVLNCDKQDFPSCYTLTTDDVPFSDSFFMKDDLLQGNGLSWVLSDMVDVGNQRESQPNITQRSEPEETGGGCREEVPLPELLASKIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGQIPPEQLCSMTAEELASKELSQWRIAKAEELAQMVVLPNSDVDFRRLVKKTHKGEFQVEVEHEDNVSVEEVSGGTTSVARSQTAMKDVEGTSSKSDVNIDAEKRNLQKDDTFSITISSNDGTDPMQGLMTDDALKDPDFLPPIVSLDEFMESLHSEPPFENLRLESGKVAPPLDKDDSGVGSRSKSSDLTPNEQPVVTPDKFQSTCVNSDAEKEKKADAESGTISSDMGYSGSQADMKSTDGGTKERSIDDVKPASSDTEFKGNQFHAEGRYGNDNRYLKDAVPTKGECLWEGMLQPNISTTQSVISFYKSGEKTAAKDWPGFLEIKGRVRLDAFEKFLQDLRLSRSRAIMVSHFLSKELDEQSTLREVADSYISDERVGFAEPVHGVELYFCPPHKKTVEMLSNILPKEQIEAVNSIDNGLIGIIVWRKTNLTSSISPTTATHHKHSSKRQQYFSRRQQDINANANSTHKAVPHTDFKTVENENDDDDDEVPPGFGPPAARVEDDLPEFNFSSSSIPPHLAQKPKEVPNMVTLHSVNPAPPPARPVEQMRELVYKYGQNKPSAPSVNWQDKFGGTIQPWNDDDDDIPEWQPQTSQQNQFLPQQTMHNFHLRPHILNQSFPGSQQQPIMTPQYLQPPMNVAHSQRNFDPQWVPSPQGTILQPRGGPPYGAPAQGTTWPQNVSRSRGY 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00805 1151 MobiDBLite consensus disorder prediction 149 224 - -
Phco7g00805 1151 MobiDBLite consensus disorder prediction 102 131 - -
Phco7g00805 1151 ProSiteProfiles TFIIS central domain profile. 389 507 IPR003618 GO:0006351
Phco7g00805 1151 CDD SPOC_TFIIS 754 892 - -
Phco7g00805 1151 MobiDBLite consensus disorder prediction 389 409 - -
Phco7g00805 1151 SMART mid_6 387 490 IPR003618 GO:0006351
Phco7g00805 1151 Gene3D - 395 482 IPR036575 GO:0006351
Phco7g00805 1151 SUPERFAMILY Elongation factor TFIIS domain 2 416 483 IPR036575 GO:0006351
Phco7g00805 1151 MobiDBLite consensus disorder prediction 533 598 - -
Phco7g00805 1151 MobiDBLite consensus disorder prediction 671 685 - -
Phco7g00805 1151 MobiDBLite consensus disorder prediction 704 721 - -
Phco7g00805 1151 MobiDBLite consensus disorder prediction 533 559 - -
Phco7g00805 1151 MobiDBLite consensus disorder prediction 574 589 - -
Phco7g00805 1151 MobiDBLite consensus disorder prediction 1107 1121 - -
Phco7g00805 1151 MobiDBLite consensus disorder prediction 647 670 - -
Phco7g00805 1151 PANTHER TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN 101 977 - -
Phco7g00805 1151 MobiDBLite consensus disorder prediction 149 217 - -
Phco7g00805 1151 MobiDBLite consensus disorder prediction 688 703 - -
Phco7g00805 1151 Pfam Transcription factor S-II (TFIIS), central domain 412 495 IPR003618 GO:0006351
Phco7g00805 1151 MobiDBLite consensus disorder prediction 929 987 - -
Phco7g00805 1151 MobiDBLite consensus disorder prediction 624 725 - -
Phco7g00805 1151 MobiDBLite consensus disorder prediction 64 86 - -
Phco7g00805 1151 MobiDBLite consensus disorder prediction 1137 1151 - -
Phco7g00805 1151 Pfam SPOC domain 750 892 IPR012921 -
Phco7g00805 1151 MobiDBLite consensus disorder prediction 1107 1151 - -
Phco7g00805 1151 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00805 Phco-Chr7 6302150 6308052 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00805 7 6302150 6308052 Phco7g00805 7 6302150 6308052 ECH