Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00788 ATGTCTCAGCTTCATCCTTCCACTTCCTCCCTTTGCCTACTTCTCTGCACTCTCTTCCTCCACCACTCTTTAGCTGACGTTGGCACTGCAGCACGCTATGGCCCTCCCTTTTTGCCCACTGCATGTTTCGGTAGAGACGCATCACAGTTTCCGTCCAGTAACCTCTTTGGTGCCGTCGGGGAGGGTTTATGGGACAATGGTGCCGCATGTGGGAGGCAGTATCAGGTGCGGTGCATCAGTGCTGCAGTTCGCGGAACTTGCATTCCTGGGCAGATGATTCAGATCAAGATCGTTGATCGAGCGCAATCATCGGTTTCTGGGCCTTCTTTAGAGGGAACTACGTTGGTCCTCTCCTCCAAGGCCTTTCAGGCCATCGCCAATGCTTCTGCATCCTTCATTAACGTAGAATACCAGCAGTAA 420 0.5262 MSQLHPSTSSLCLLLCTLFLHHSLADVGTAARYGPPFLPTACFGRDASQFPSSNLFGAVGEGLWDNGAACGRQYQVRCISAAVRGTCIPGQMIQIKIVDRAQSSVSGPSLEGTTLVLSSKAFQAIANASASFINVEYQQ 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00788 139 CDD DPBB_EG45-like 26 138 - -
Phco7g00788 139 Gene3D - 26 139 IPR036908 -
Phco7g00788 139 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 28 139 IPR007112 -
Phco7g00788 139 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 10 138 - -
Phco7g00788 139 SUPERFAMILY Barwin-like endoglucanases 13 139 IPR036908 -
Phco7g00788 139 Pfam Lytic transglycolase 62 137 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00788 Phco-Chr7 6119578 6120131 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00788 7 6119578 6120131 Phco7g00788 7 6119578 6120131 ECH