Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00777 ATGTGTTCGAAACACACGAGGAATTGTTTGAATACTAACTATATATATAAATGCACGGTGGAATTTGGAAACTATGAAGGGAAAATGAGCAGACCAGGAGATTGGAACTGCAGAACATGCAACCACCTGAACTTCCAGAGAAGAGAATCGTGCCAGCGATGCGGGGAGCCAAGGAGCGGCGGCGACTACGGCGGCGGCTTCGGAGGCAGAGGCTCTTCCTCCTTTGGCTTCACCACTGGTCCTGATGTTCGTCCCGGTGACTGGTACTGCACCGTCGGAAACTGTGGAGCCCACAACTTTGCCAGCCGCTCCAGCTGCTTCAAGTGCGGTGTCTCCAAGGAGGACTCCTCCACCGGATCATACGACGTCGACATCACCCGAATGAGACCCTACGGCTTCGGCGGCGGCTCCTCCGCCCGCCCTGGCTGGAAATCCGGTGACTGGATATGCACCAGGTCTGGATGCAACGAGCATAACTTCGCGAATAGAATGGAGTGCTACAGATGCAATGCACCGAGGGACTCTAGTAGTGGCAGGCCTCCCTATTCATCGTAG 555 0.5495 MCSKHTRNCLNTNYIYKCTVEFGNYEGKMSRPGDWNCRTCNHLNFQRRESCQRCGEPRSGGDYGGGFGGRGSSSFGFTTGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGVSKEDSSTGSYDVDITRMRPYGFGGGSSARPGWKSGDWICTRSGCNEHNFANRMECYRCNAPRDSSSGRPPYSS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00777 184 ProSiteProfiles Zinc finger RanBP2 type profile. 84 115 IPR001876 -
Phco7g00777 184 FunFam Ran-binding zinc finger protein 78 115 - -
Phco7g00777 184 Pfam Zn-finger in Ran binding protein and others 84 114 IPR001876 -
Phco7g00777 184 Pfam Zn-finger in Ran binding protein and others 31 58 IPR001876 -
Phco7g00777 184 Pfam Zn-finger in Ran binding protein and others 144 173 IPR001876 -
Phco7g00777 184 SMART zf_4 146 172 IPR001876 -
Phco7g00777 184 SMART zf_4 33 57 IPR001876 -
Phco7g00777 184 SMART zf_4 86 112 IPR001876 -
Phco7g00777 184 SUPERFAMILY Ran binding protein zinc finger-like 80 115 IPR036443 -
Phco7g00777 184 ProSitePatterns Zinc finger RanBP2-type signature. 148 169 IPR001876 -
Phco7g00777 184 SUPERFAMILY Ran binding protein zinc finger-like 27 61 IPR036443 -
Phco7g00777 184 PANTHER ZINC FINGER PROTEIN 81 176 - -
Phco7g00777 184 ProSitePatterns Zinc finger RanBP2-type signature. 35 54 IPR001876 -
Phco7g00777 184 ProSiteProfiles Zinc finger RanBP2 type profile. 144 175 IPR001876 -
Phco7g00777 184 FunFam Ran-binding zinc finger protein 134 175 - -
Phco7g00777 184 ProSiteProfiles Zinc finger RanBP2 type profile. 31 60 IPR001876 -
Phco7g00777 184 SUPERFAMILY Ran binding protein zinc finger-like 137 176 IPR036443 -
Phco7g00777 184 ProSitePatterns Zinc finger RanBP2-type signature. 88 109 IPR001876 -
Phco7g00777 184 Gene3D - 28 61 - -
Phco7g00777 184 Gene3D - 80 116 - -
Phco7g00777 184 Gene3D - 137 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00777 Phco-Chr7 6035637 6036784 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00777 7 6035637 6036784 Phco7g00777 7 6035637 6036784 ECH