Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00768 ATGAAGCTCTTTTCCTTTCTAATATTTTCAAGCCTATTGCTCAAACAAGTGAGCCTAGTTATTGGAGACGTTGGTACTGCTGCATCTTATGGACCACCATACATTCCCACTGCTTGCGGTGGAAATAGGGCAGGGCAATTTCCTCCTGGAAATCTATTTGTGGCTGTGAATGAAGGGTTATGGGACAATGGAGCAGCGTGTGGAAGGAGATACAGAATAAGGTGCGTGAGTGGAAACAATAGACCATGCAAAGGTGGCAGCATCGATGTGAAAGTGGTAGATTCTTGTCCAGGCTCACCTTGTTCCAACAGTTTCCTCATGTCAAAAGATGCCTTTGCAGCTATTTCGCACTTCCCTCATGCAAAAATCAATATTGAATATACTCAGTAA 390 0.4359 MKLFSFLIFSSLLLKQVSLVIGDVGTAASYGPPYIPTACGGNRAGQFPPGNLFVAVNEGLWDNGAACGRRYRIRCVSGNNRPCKGGSIDVKVVDSCPGSPCSNSFLMSKDAFAAISHFPHAKINIEYTQ 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00768 129 SUPERFAMILY Barwin-like endoglucanases 21 129 IPR036908 -
Phco7g00768 129 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 4 128 - -
Phco7g00768 129 Gene3D - 23 129 IPR036908 -
Phco7g00768 129 SMART dpbb_1 54 127 IPR007112 -
Phco7g00768 129 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 36 129 IPR007112 -
Phco7g00768 129 CDD DPBB_EG45-like 23 128 - -
Phco7g00768 129 Pfam Lytic transglycolase 55 127 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00768 Phco-Chr7 5965857 5966439 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00768 7 5965857 5966439 Phco7g00768 7 5965857 5966439 ECH