Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00763 ATGAGTGGTAAAGACTTGCATTCAATATGCAGGAGGGGTGCCCGCCCCAACCTTGTTACGACTGTGGGCACTCTTTCTTACACCGATCTGATCCTTAGTCTTGGGCAACTTAGTATCTGGTTACCTGTAGGCATTGGAAGCCGAATCAGAGCACACTTGACCCGTCAAACTGCAATTCCACTTCACAATCGCAATTCCAAACCTTCAAACACAGACAGTCAGGCCGTGATGGCCTGTTCAAGGTGCAATTTGTTTCTGAAAGGCATGGACTTAGAAGCAAGTGATAAGGATTCAGTAGTGACTCAGATCAGCATTGGTGGATTTGGCAGCGAGGTAAAAGCAAGTGAGCTGGTGAACTATTTGGAGGATAAAATTGGACTTGTCTACCGGTGTAGGTTGAAGACTTCTTGGACCCCTCCAGAGTCATATCCAGAATTTAATATCACTGATACTGCAAAAATTAAGAGAACAGATGACTATAAGAAAGTCGAGCCTCATGCCTTCGTCCATTTTGCATCTCCAGAATCTGTGACTGCTTCCCTGAATGCTTCAGGTTGTTGTGATCTGTTTTTAAAGAATGAACCCTTAAAGGTCAGCTGTGGACCTGAAAATCCATACTTTCTGAACAAAAGGAGGAGAACTACAATTCCTTTTAAGATGTCTGATGTAATCGTTGAAATTGGGACTTTGGTTAGCCCAGGGGAGTTTTTTGTTGCATGGAAAGGACCTGATAAAGGAGTAAAATTTCTAGTGGATCCTTTTGATGGCATGTGCAGGTTTTGTTTCACTAGAGATATAGCATTCCCATTCAAAGGTATAGAAAGACAAGCAGTTATAAAGTGTGATTTTCAGGTGGGATTCCTGGTTAGAGACATTAATGAGATAAGGAGATATAATGATACATCGTATCTCGTTGTTTTATTACACCTAGCTTCTTCACCTTGGGTTTGGTACAGAACTGCCGAGGATGACATTGAAGATTTAGTGCCATTTGATTTGCTGGATGATGATGATCCTTGGATTAGAACCACTGATTTTACTCCTAGTGGGGCAATTGGTCGATGCAATTTTTATAAAATTTCAATTCCTCCTCGGCATGGTGCAAAATTCATGAAGGCCATGCTTTATCTGAAAGTTCAGAGAGTGCAAATGCAGGAGCTTCCACTTAAACAGACTCTTAGAACACTGAACGAACCTGATTTTGGCACGCCCATGTCAAATGCTTTCTTCTTTATAGATTATCAAGTGGGCATTACTTTTGACATAATTTTTTTGGTCAATGCTATTGTACATAAAGGCATATTCAATCAGCACAGGTTGTCAGATAGGTTTTTCGAATTGCTAAGAAATCAATCTAAGGAGCTCAACGTGGCTGCTCTGAAGCATATATGTTCTTACAAGCGCCCGGTATTTGATGCAACTAAGAGGCTAAAAGTAGTTCAAGAATGGTTGCTTAGAAACCCAAAACTTTATCAGATGTCTAAACAGTTGGATGATATTGTTGAGGTTAGAAGATTGGTTATTACTCCATCAAAAGCGTATTGTATACCACCTGAAGTTGAACTGTCCAACAGGGTTCTCCGAAAATTCAGAGAAGTTTCAGATTGTTTCTTGAGAGTCACCTTTATGGATGAAGGCATGCAGACAATTAATGTGAATGCCCTTAACTATTATGTTGCTCCTATTGTGAAGGAAATCACATCAAACACTTTCCCTCAAAAGACAAAAATATATAAAAGGGTGAAGACTATCTTGGAAGAGGGATTTTACTTTTGTGGCCGAAAATATTCATTTTTAGCCTTTTCATCCAATCAACTTAGAGATCGTTCTGCTTGGTTTTTTGCTGAAGAAAAGATGAAATGTGATGAAATACGGAGTTGGATGGGCAAGTTTAATCAGAGGAATGTTGCAAAGTGTGCTGCTAGGATGGGACAATGCTTCTCATCTACCTATGCAACGGTGGAAGTTGTTGCAAATGAGGTTAACTCCATGCTACCTGATGTTGAGCGGAATAATTATGTTTTCTCTGATGGTATTGGTATTATCACTCCTGATCTTGCTAGGGAAGTTGCAGAAAAACTGAAATTGGACAATGTACCCTCTGCTTACCAGATCAGATACGCTGGTTTTAAAGGGGTTGTAGCCTCTTGGCCTGCTAAAGGGGATGGGATCAGACTTTCTTTGAGGCCTAGTATGAACAAGTTTCAATCTACTCATACTATCTTGGAGATATGTGCTTGGACTAGGTTTCAGCCTGGTTTTCTTAACAGGCAGATTATAACATTGCTTTCAGCACTGGGTGTGCCTGATGAAATATTTTGGCAAATGCAGGAGGCAATGCTTTGGAAGTTAAATCAAATGCTTGTGGATGCAGATATCGCTTTTGATGTTCTTACCAAATCATGCGCTGAGCATGGGAATGCTGCAGCAATAATGTTAAGTTGCGGCTTCAGTCCCCTGACAGAACCTCATCTTAGAGGTATTTTAACTTCCACACGTGCTGCACAGCTTTGGGGACTCAGAGAAAAGTCCCGGATTTTTGTATCATCTGGGCGATGGTTGATGGGTGTCTTAGATGAGTCGGGTGTGCTTGAACAGGGGCAGTGCTTTGTTCAAGTGTCTACTCCTTCTCTTGAAAATTGTTTCTCAAAGCATGGATCAAGATTTTCAGAGACAAAGAACCTACAAGTAGTTAAAGGTTTTGTGGTTATAGCAAAAAATCCTTGTCTCCATCCAGGAGATGTACGAGTTTTGGAGGCAGTTGATGCCCCCGATTTACATCATTTATATGATTGTCTTGTTTTCCCTCAGAAGGGTGACAGACCCCATACAAATGAAGCTTCTGGAAGTGACCTTGACGGGGATCTGTATTTTGTCACATGGGATGAAAATCTCATTCCACCAAGTAAGAGGAGCTGGATACCTATGGAGTATGCCGCTCAAGAAAGCAAACTTCTGACACGTCAAGTCATGACTCGAGACATCATAGACTTTTTTGTCAGAAACATGGTAAATGAACATTTGGGTGCTATCTGCAACGCACATGTGGTACATGCTGATTCCAGTGATTATGATGCCTTGGATGAGAAATGCATACACTTGGCGGAGCTAGCAGCTACTGCTGTTGATTTTCCAAAGACTGGGAAGCTTGTCACTATGCCTAATCATCTGAAACCAAAACTGTACCCTGATTTCATGGGGAAAGAGAAGCACCAGTCGTACAGGTCGAAGAAAATTCTGGGTAGACTTTACCGGCGTATCAAAGATGCTTATGATGAAGATATTGATGCACCCTATTTGAACTTTGTGCCCGGTGATATACCATATGATAAAGATCTTGAGGTTCCAGGATCTGCTGCTTTTATTGCTGATTCCTGGGAGCAAAAATGCGCATATGACGGCCAGTTGAGTGGGCTACTTGGTCAATACAAAGTGAAAAGAGAAGAGGAAGTTGTTACTGGACAGATCTGGTCCATGCCAAAATACAATAGTAGGAAGCAAGGGGAGCTTAAGGAGAGGCTGAAGCACTCATACAGTGCCCTGAAAAAGGAATTTAGGCACACTTTTGAGAAATTGAGTTCAGATGTTGGAGATTTAAGCGAGGAAGAAAAAAATTTGTTGTATGAGCAGAAAGCTTCGGCCTGGTATCAGGTGACATATCATCCTTACTGGGTCAAAAAGTCTCTTGATCTGCAAGATAAATCCCCAGAGAACCAAGAGGCTGATTGTTTGGGAAGCACTGTGATGTTGAGTTTTCCTTGGATTGCAGTTGATTACCTAGCTCGCACAAAGATAAGGGAACGGCATCAGAAATCTGGAAATTTTTATTCAACTAAGCCAGTTGATTCTCTGGCAAAGTATCTATCTGAAAAGTTATAA 3879 0.4122 MSGKDLHSICRRGARPNLVTTVGTLSYTDLILSLGQLSIWLPVGIGSRIRAHLTRQTAIPLHNRNSKPSNTDSQAVMACSRCNLFLKGMDLEASDKDSVVTQISIGGFGSEVKASELVNYLEDKIGLVYRCRLKTSWTPPESYPEFNITDTAKIKRTDDYKKVEPHAFVHFASPESVTASLNASGCCDLFLKNEPLKVSCGPENPYFLNKRRRTTIPFKMSDVIVEIGTLVSPGEFFVAWKGPDKGVKFLVDPFDGMCRFCFTRDIAFPFKGIERQAVIKCDFQVGFLVRDINEIRRYNDTSYLVVLLHLASSPWVWYRTAEDDIEDLVPFDLLDDDDPWIRTTDFTPSGAIGRCNFYKISIPPRHGAKFMKAMLYLKVQRVQMQELPLKQTLRTLNEPDFGTPMSNAFFFIDYQVGITFDIIFLVNAIVHKGIFNQHRLSDRFFELLRNQSKELNVAALKHICSYKRPVFDATKRLKVVQEWLLRNPKLYQMSKQLDDIVEVRRLVITPSKAYCIPPEVELSNRVLRKFREVSDCFLRVTFMDEGMQTINVNALNYYVAPIVKEITSNTFPQKTKIYKRVKTILEEGFYFCGRKYSFLAFSSNQLRDRSAWFFAEEKMKCDEIRSWMGKFNQRNVAKCAARMGQCFSSTYATVEVVANEVNSMLPDVERNNYVFSDGIGIITPDLAREVAEKLKLDNVPSAYQIRYAGFKGVVASWPAKGDGIRLSLRPSMNKFQSTHTILEICAWTRFQPGFLNRQIITLLSALGVPDEIFWQMQEAMLWKLNQMLVDADIAFDVLTKSCAEHGNAAAIMLSCGFSPLTEPHLRGILTSTRAAQLWGLREKSRIFVSSGRWLMGVLDESGVLEQGQCFVQVSTPSLENCFSKHGSRFSETKNLQVVKGFVVIAKNPCLHPGDVRVLEAVDAPDLHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMEYAAQESKLLTRQVMTRDIIDFFVRNMVNEHLGAICNAHVVHADSSDYDALDEKCIHLAELAATAVDFPKTGKLVTMPNHLKPKLYPDFMGKEKHQSYRSKKILGRLYRRIKDAYDEDIDAPYLNFVPGDIPYDKDLEVPGSAAFIADSWEQKCAYDGQLSGLLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRHTFEKLSSDVGDLSEEEKNLLYEQKASAWYQVTYHPYWVKKSLDLQDKSPENQEADCLGSTVMLSFPWIAVDYLARTKIRERHQKSGNFYSTKPVDSLAKYLSEKL 1292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00763 1292 Pfam RNA dependent RNA polymerase 508 1087 IPR007855 GO:0003968
Phco7g00763 1292 PANTHER RNA-DEPENDENT RNA POLYMERASE 99 1289 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00763 Phco-Chr7 5920191 5928114 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00763 7 5920191 5928114 Phco7g00763 7 5920191 5928114 ECH