Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00755 ATGAGATTAGGTGTGAGTAAGCACGTTGTGCGGTGCTCAATCGGCACCGTTTCAGGCGAGTCCAAAACCCATTTTCCCGCCAAATCCCAACGTTCATCTTTCTCAACTGTCAAGTTCCACCCCGACAATGGTTCGTCAGATTTAGCGGTTTCTAGTAGCAGCAGGAGAGAGCTAATCTGCATAGTCACGTGGCCATGTCTTCTTCCTCTCATAGGTTGTCTCCCAGCCAACGCCTTGCAGGCAGGTGCAAAGGAATATCTTCTCATTAAAGAAGAGGTGAGGAAGGTGTTGTCTAAGGGAAAGGCAGCTGGGGTGCTCCGATTGGTTTTCCACGATGCTGGAACCTTTGACATCGATGATAACACAGGTGGTATGAATGGTTCTATAGTCTATGAACTTGAAAGACCCGAAAATGCTGGCCTGAAGAGATCAGTAAAGGTTCTGCAAAAAGCAAAGACTCAGATAGATGCTATCCAACCAGTATCTTGGGCGGACATGATTGCTGTGGCTGGAGCTGAAGCAGTTGAAGTATGTGGAGGTCCACCTATCCAAGTTTCACTGGGCAGGCTAGATGCACTGGTGCCTGATCCAGAAGGGCGACTCCCTGAGGAATCTCTTAATGCTTCTGCTTTGAAGAAATGTTTCCAGAGCAAAGGCTTATCAACACAAGAACTAGTGGCATTGTCCGGGGCCCACACTATTGGAAGCAAAGGTTTTGGGAGACCAGATTCTTTTGATAATTCATATTATAAGGTCCTTTTGGAGAAGCCATGGACGTCTTCAGGTGGTATGTCGAGTATGATTGGCCTTCCTTCAGATCACGCCCTTGTTGAGGATGATGAATGCTTAAGATTGATTAAAAAATACGCCGACAGTGAGAATCTGTTCTTTGAAGATTTCAAAAATGCGTACGTCAAGCTGGTGAATTCTGGTGCGAGGTGGAAAAACATGTAA 954 0.4623 MRLGVSKHVVRCSIGTVSGESKTHFPAKSQRSSFSTVKFHPDNGSSDLAVSSSSRRELICIVTWPCLLPLIGCLPANALQAGAKEYLLIKEEVRKVLSKGKAAGVLRLVFHDAGTFDIDDNTGGMNGSIVYELERPENAGLKRSVKVLQKAKTQIDAIQPVSWADMIAVAGAEAVEVCGGPPIQVSLGRLDALVPDPEGRLPEESLNASALKKCFQSKGLSTQELVALSGAHTIGSKGFGRPDSFDNSYYKVLLEKPWTSSGGMSSMIGLPSDHALVEDDECLRLIKKYADSENLFFEDFKNAYVKLVNSGARWKNM 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00755 317 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 84 315 IPR044831 GO:0004601|GO:0034599
Phco7g00755 317 Gene3D - 90 311 - -
Phco7g00755 317 Gene3D Peroxidase, domain 2 202 304 - -
Phco7g00755 317 PRINTS Haem peroxidase superfamily signature 102 116 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phco7g00755 317 PRINTS Haem peroxidase superfamily signature 179 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phco7g00755 317 PRINTS Haem peroxidase superfamily signature 161 178 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phco7g00755 317 PRINTS Haem peroxidase superfamily signature 224 239 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phco7g00755 317 FunFam Adenylate/guanylate cyclase 202 304 - -
Phco7g00755 317 SUPERFAMILY Heme-dependent peroxidases 99 313 IPR010255 GO:0004601|GO:0006979|GO:0020037
Phco7g00755 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 224 234 IPR019793 -
Phco7g00755 317 FunFam L-ascorbate peroxidase 92 210 - -
Phco7g00755 317 Pfam Peroxidase 91 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phco7g00755 317 ProSitePatterns Peroxidases active site signature. 102 113 IPR019794 GO:0004601
Phco7g00755 317 ProSiteProfiles Plant heme peroxidase family profile. 102 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phco7g00755 317 PRINTS Plant ascorbate peroxidase signature 179 191 IPR002207 GO:0004601|GO:0006979|GO:0020037
Phco7g00755 317 PRINTS Plant ascorbate peroxidase signature 288 312 IPR002207 GO:0004601|GO:0006979|GO:0020037
Phco7g00755 317 PRINTS Plant ascorbate peroxidase signature 200 217 IPR002207 GO:0004601|GO:0006979|GO:0020037
Phco7g00755 317 PRINTS Plant ascorbate peroxidase signature 218 239 IPR002207 GO:0004601|GO:0006979|GO:0020037
Phco7g00755 317 PRINTS Plant ascorbate peroxidase signature 160 178 IPR002207 GO:0004601|GO:0006979|GO:0020037
Phco7g00755 317 PRINTS Plant ascorbate peroxidase signature 120 130 IPR002207 GO:0004601|GO:0006979|GO:0020037
Phco7g00755 317 PRINTS Plant ascorbate peroxidase signature 102 117 IPR002207 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00755 Phco-Chr7 5855867 5859600 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00755 7 5855867 5859600 Phco7g00755 7 5855867 5859600 ECH