Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00692 ATGGCGACAACAGATAAAGAATTGGAAGAGCAACTTCTCGAAGCCGGTAACAAACTCGCAGATCCACCCTCATCCGTGGAGGAGCTTCTCTCACTTCTAGACCTAGTAGAGAGTTTCTTATCAAGGGTTGAACAGTCACCTTCAAACTCTATGCAAATTGCACTCTCTCCATCATTGAAAGCATTGATTGCAGACAAACTTTTGAGGCACTCAGATGATGATGTCAAAGTCGCAGTTGCCTCTTGCATCAGTGAAATAACAAGAATCACTGCACCTGAAGCTCCTTATGATGATGATCAAATGAAGGAGGTCTTTCAAGTAATAGTATCTTCATTTGAAAATCTACATGATAAGTTAAGTCGATCATATGCAAAGAGGACCTCAATTCTTGAAACTGTAGCAAAAGTCAGATCGTGTGTAGTAATGCTGGATCTTGAATGTGATGCCCTGATTTTGGAGATGTTTCAGCATTTCTTTAAAGCAATAAGGGAACATCATCCAGAAAATGTTTTTTCATCCATGGAAACAATTATGACCCTTGTTCTAGAGGAAAGTGAAGATATATCCTTAGACCTGCTGTCTACACTTCTGGCCACAGTTAAAAAAGATGACGAGGAAGCTTTTCCAATTGCCAAAAAATTGGGTGAGAGGGTCCTTGAAAGTTGTGCAACCAAGCTTAAACCCTATTTGGTTCAAGCAGTGAAATCCTTGGATATACCTATGGATGATTATAGTTTGGTACTTTCTTCAATATGCCAAGACACATCTGATACCGGGGAGAAAAATGATACATGTGTTACTAGTGAGCACGTGGAAGATAAGGTTGAGTTGGCAAAACAGCCACGTGAGGAATCACCACATGTAGACAAGAAGGATCCAAGGGAAGTTACAGCCTCTCAACAAGAAAATCCTGATGTAAATATATCTCCAAAGTCGGTCATGAGCAATGGTGTTGAAGAAGATACTTCTTTAGCTGATTCCAAGTCCATTAAAAAGCAAGAGGATGCTGACTGCTCTAATCACTCTGAAGGTTTGAATATATCTGGTCATGAGGTGTGTAATGATTTAGACCCTGAAAAAGTTGAGAATAGTAAAAATAAGCCAGAACAATCTACCAAGAGACGACGGAAGAAATCAAGCTCTTCAACTAAATCTGCTAAACTTTCCAAGGGTCAAGATGCCCCTAATGTTAAGGAAACTGAGAAAATGCTCAACTATGAAAGCAACAGCAAGAAAGTACCCAGTTCCCCTCATGAGGACCATTTTGTTGAAGCAGCAGGACCTTCACAGAACAACAAAGAAATTGATGCTAAGACTTCATCACCGAAGGCATGCAACAATGAATCTGAAGTTGCTTCTCCACCAAGTGAGAGCCTCCATGATGAAAATCGATTGAAGAAACATGGACGAACAAAAAAGAAAGACGGCCCCATAAAATATGTGGCTGGAGAGGATGTTTCCAAGGTGTCTGGAGGAGCTAGTGATTCAGAAGCCAGACCTGCAAGGCGGTCAATGAAAAAGGCACCCGGTCAGAACTCTGTGAAAAAAACTAGTGTTGTAGATTCACTTAAAAAGGGAATTGGGGCAGCAAATGACGCAGATGGTAAAAAGCATTCAGCGAAGAAATTAGATGAAAACAAAAAGGGTAGTGGTGGATCCTCTTCAAAGCAGATTGGGGACAAGAAAAAGGGAGGGAGGGTGAAAGCTAACTCTGAAACAGATCTAGCAAAATCAACTGCTATGGAAGTGGACAGGGAAGTGGTTTCTTCTCCGAGGTCTGGTACAAAATTAACTAAAGATGAAAGCTCAGAGGAGACTCCCAGGACAAATGTGAAAAGGAAACGCACTTCAGGAAAAGAAAATGAGTCTGATGTGAAGGAATATGGTGAAAACCTTGTTGGTTTAAGGGTCAAAGTTTGGTGGCCTGAGGATCGCGAGTTTTACAAAGGTGTTATCCATTCTTTTTATTCTGGCAAAAAGAAGCACAAGGTCTTGTACGATGATGGTGATGAAGAAACATTAAATCTCGTCAAGGAAAAATGGAAGTTCATTGAAGCTGACTCAGATGCAGATGAGGAAGGACAAAGTGATCGTGAAAGTCTAGATGCTTCCACTGATATGCCACCGAAGAAGAAAGGGAAAACTAGTGCTGGCGAATCAACCAAGCAAGGAAAGGTGGATGATTCTTCCAAAAGCGGTGGAGCAGCAACACCCAGTAGATCAAAGGGTTCCATGAAGTCTAGCCAAAAGTCCAAAGATGGCAACAAATCCAAAGATTCCAAGACTATTAGCAAATCTGAGGACCGAGTTAGTAGAAAATCTAAGGACAGCACTCCTAAAAGTGGTAGCAGTAAATCTGTTGCTGCTGCTAAGAAAATGAGTAATAAATCCAAAAACCCTGATACGTCCAAGATTAGCGATTCAAAGGATGATGATACTACCAAGCCAAAATCCGCTGCCAAGTCTAAGCAAGAAACTCAAAGAAGTGGGAAGTCCAAGCAAGAAACCTTGAAGACTGCCATTTCTAAAGGAAAGCCTCTTAAAAGTGGTGGAAAGAGTGATGTTAATGGTACTGGCAAGGTGAAATCCGGTTTATTGAAAAGAAAATATGCGGAGGATGAAAATTCAGATGCTTGA 2637 0.4103 MATTDKELEEQLLEAGNKLADPPSSVEELLSLLDLVESFLSRVEQSPSNSMQIALSPSLKALIADKLLRHSDDDVKVAVASCISEITRITAPEAPYDDDQMKEVFQVIVSSFENLHDKLSRSYAKRTSILETVAKVRSCVVMLDLECDALILEMFQHFFKAIREHHPENVFSSMETIMTLVLEESEDISLDLLSTLLATVKKDDEEAFPIAKKLGERVLESCATKLKPYLVQAVKSLDIPMDDYSLVLSSICQDTSDTGEKNDTCVTSEHVEDKVELAKQPREESPHVDKKDPREVTASQQENPDVNISPKSVMSNGVEEDTSLADSKSIKKQEDADCSNHSEGLNISGHEVCNDLDPEKVENSKNKPEQSTKRRRKKSSSSTKSAKLSKGQDAPNVKETEKMLNYESNSKKVPSSPHEDHFVEAAGPSQNNKEIDAKTSSPKACNNESEVASPPSESLHDENRLKKHGRTKKKDGPIKYVAGEDVSKVSGGASDSEARPARRSMKKAPGQNSVKKTSVVDSLKKGIGAANDADGKKHSAKKLDENKKGSGGSSSKQIGDKKKGGRVKANSETDLAKSTAMEVDREVVSSPRSGTKLTKDESSEETPRTNVKRKRTSGKENESDVKEYGENLVGLRVKVWWPEDREFYKGVIHSFYSGKKKHKVLYDDGDEETLNLVKEKWKFIEADSDADEEGQSDRESLDASTDMPPKKKGKTSAGESTKQGKVDDSSKSGGAATPSRSKGSMKSSQKSKDGNKSKDSKTISKSEDRVSRKSKDSTPKSGSSKSVAAAKKMSNKSKNPDTSKISDSKDDDTTKPKSAAKSKQETQRSGKSKQETLKTAISKGKPLKSGGKSDVNGTGKVKSGLLKRKYAEDENSDA 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00692 878 CDD Tudor_Agenet_AtEML-like 633 683 - -
Phco7g00692 878 MobiDBLite consensus disorder prediction 432 454 - -
Phco7g00692 878 MobiDBLite consensus disorder prediction 697 718 - -
Phco7g00692 878 MobiDBLite consensus disorder prediction 685 878 - -
Phco7g00692 878 Gene3D - 629 678 - -
Phco7g00692 878 MobiDBLite consensus disorder prediction 263 298 - -
Phco7g00692 878 MobiDBLite consensus disorder prediction 746 779 - -
Phco7g00692 878 MobiDBLite consensus disorder prediction 530 549 - -
Phco7g00692 878 SMART TUDOR_7 629 684 IPR002999 -
Phco7g00692 878 MobiDBLite consensus disorder prediction 353 369 - -
Phco7g00692 878 FunFam Binding protein 628 680 - -
Phco7g00692 878 MobiDBLite consensus disorder prediction 719 745 - -
Phco7g00692 878 MobiDBLite consensus disorder prediction 255 628 - -
Phco7g00692 878 MobiDBLite consensus disorder prediction 597 628 - -
Phco7g00692 878 Pfam Sister chromatid cohesion protein PDS5 protein 28 232 - -
Phco7g00692 878 SUPERFAMILY Tudor/PWWP/MBT 631 673 - -
Phco7g00692 878 MobiDBLite consensus disorder prediction 780 801 - -
Phco7g00692 878 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 292 824 IPR039776 GO:0007064
Phco7g00692 878 SUPERFAMILY ARM repeat 49 237 IPR016024 -
Phco7g00692 878 MobiDBLite consensus disorder prediction 324 339 - -
Phco7g00692 878 MobiDBLite consensus disorder prediction 802 832 - -
Phco7g00692 878 MobiDBLite consensus disorder prediction 299 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00692 Phco-Chr7 5282113 5293026 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00692 7 5282113 5293026 Phco7g00692 7 5282113 5293026 ECH