Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00683 ATGAGCCATACTCCCAGGATTGGTGTCCACTGTGTCTTTCTGTGTTATAATATTTTGATTTTGTCGTACACTGTTTTTGCATCAGAATCATCCTCTTCTCGCTGTAAAGCATGGTTAGTGCAATCCATTCCCACCAATATGCCCCACCTACACCATGTTCCTGGCACCCTCTCTACAGGGGATGTGCTTCGGTGGCTGGCTGCAAACTCCACGACGAGTCTTCACATAATTGCTCAATACTGGCAGCTTCTACCTTCCCCCAACGATTCTCGATCTGGGGACTATGGTTACACTCAACATCAGATGCATGAATTTGGTGCCAGTCAAGGTGTTTCTCTTTATCAAGAATTAGATGCTGCTGCTGACCGGAATGTTAGCATCAGGTTACTGTCCCACTCTGGAGTATATCCAACGTTTACCTTAGAACCATCCAAACTTGCTTTCGGAAGGCCAAATGTTGAGAATGTGACATTGCTGCTAGAGGATTGGTGGGGCTCCGGCATTGTCCATGCCAAAGTTTGGATATCTGATAATAGGGATGTGTATATTGGATCTGCAAACAATGACTGGAAATCTCTCACGCAGGTCAAGGAACTCGGAATTTATTTTACTGATTGCTCTGAAATAGCTAAAAAGGTTGAGGCGTACTTTGACAATTTATGGACACTTGCATCTCTCAATTCTTCAGCTTACACGAAAACAGTGTTTGATCAAGAGTGGCAAGTTGAGAGGAAGTTTCCTTGCTGGTCACATTTCATTGATCATAAAGAGAGGTGCAAGTCACCTCTTCGTCGATATCTGGAGACCCCTCATGTTGCAGGATATCCTATTCTGTCTGACCCTTATATGTTTGTGGTTTCATTTCAAACCCCTGGGAAGAACTACTCAACAAAGCTCCCCCAAGTCAGCTATCTATCCTTTGCACCCCCAGAGCTATTATTTGGCAAATATCAAGCTGATGAGCAGGCATGGATTGATACAATCAAGTCTGTTGGAGATAACCAGACAGTTAGAATCAGTACAATGGACTGGTTAGGACAGTCAGAATTTATGAACCAAACAATTTACTGGTCATCCTTATCCTCTGCAATATCACAGGTGGTGTTTTCGAAGAATGCAACAGTACAGGTATTGGTGGCATATTGGGCACACTCCATCAGTAACACAGATGTGTACCTGAAGTCTCTCCTCTACACCAACAATCTCTGCTCTTCCTCAAAGTACAACAAATGCTCTGGAAAAGTTGAGATAAAATATTACGTGGTTCCTGGTTTCAACATGACAGGACCTGCTATTCACGGAGGAACTAAAACAGGAAACAAATACCCTGATTTTGCAAGAGTCAATCATGGAAAATATGCAGTTAGTGATGTAAGGGCACACATTGGGACTAGCAATCTTGTATGGGACTACTTCTACACAACAGCAGGTGTCAGCTTTGGGACATACAACACTGCCATCATCTCTCAACTTAGGGAAATTTTTAATGCAGATTGGAACTCACCCTATGCTGTTTCTTTAGAAGAAATGGAGAAAGGTCACAAAAGTTCCATTTAA 1557 0.4277 MSHTPRIGVHCVFLCYNILILSYTVFASESSSSRCKAWLVQSIPTNMPHLHHVPGTLSTGDVLRWLAANSTTSLHIIAQYWQLLPSPNDSRSGDYGYTQHQMHEFGASQGVSLYQELDAAADRNVSIRLLSHSGVYPTFTLEPSKLAFGRPNVENVTLLLEDWWGSGIVHAKVWISDNRDVYIGSANNDWKSLTQVKELGIYFTDCSEIAKKVEAYFDNLWTLASLNSSAYTKTVFDQEWQVERKFPCWSHFIDHKERCKSPLRRYLETPHVAGYPILSDPYMFVVSFQTPGKNYSTKLPQVSYLSFAPPELLFGKYQADEQAWIDTIKSVGDNQTVRISTMDWLGQSEFMNQTIYWSSLSSAISQVVFSKNATVQVLVAYWAHSISNTDVYLKSLLYTNNLCSSSKYNKCSGKVEIKYYVVPGFNMTGPAIHGGTKTGNKYPDFARVNHGKYAVSDVRAHIGTSNLVWDYFYTTAGVSFGTYNTAIISQLREIFNADWNSPYAVSLEEMEKGHKSSI 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00683 518 Gene3D Endonuclease Chain A 308 502 - -
Phco7g00683 518 PANTHER PHOSPHOLIPASE D - RELATED 30 515 - -
Phco7g00683 518 CDD PLDc_vPLD3_4_5_like_2 304 500 - -
Phco7g00683 518 CDD PLDc_vPLD3_4_5_like_1 39 206 - -
Phco7g00683 518 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 165 192 IPR001736 GO:0003824
Phco7g00683 518 SUPERFAMILY Phospholipase D/nuclease 60 223 - -
Phco7g00683 518 Gene3D Endonuclease Chain A 58 225 - -
Phco7g00683 518 Pfam PLD-like domain 111 221 IPR025202 -
Phco7g00683 518 SUPERFAMILY Phospholipase D/nuclease 307 513 - -
Phco7g00683 518 SMART pld_4 165 192 IPR001736 GO:0003824
Phco7g00683 518 SMART pld_4 445 471 IPR001736 GO:0003824
Phco7g00683 518 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 445 471 IPR001736 GO:0003824
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00683 7 5197509 5200964 Phco7g00683 7 5197509 5200964 ECH