Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00677 ATGGGAATATATCTCAGCACTCCCAAAACTGAAAAGTTTTCTGCAGATGGTGAAAGTGAGCGTCTTAGATATGGTTTATCATCCATGCAAGGGTGGCGCGCAACAATGGAAGATGCCCATGCTGCATATACTGATCTGGATGATTCGACTTCATTTTTTGGTGTCTATGATGGTCATGGAGGTAAGGTGGTTGCGAAGTTTTGTGCAAAGTTTCTCCACCAAGAGGTGCTAAAAAGTGAAGCATACGTAACTGGAGATATAGGAACCTCCCTTCAGAAATCCTTTTTAAGAATGGATGAGATGATGCGTGGTCAAAGGGGATGGAGGGAATTATCAATATTGGGGGATAAGATAAACAAGATTACTGGGATGATAGAAGGTTTGATTTGGTCACCAAGAAGCAGTGATGGTATCCAAGTTGATGATTGGGCTTTTGAGGAGGGGCCTCATTCTGATTTTGCTGGACCAACTTCGGGAAGCACTGCCTGTGTTGCAGTTATTAGAAACAACCAACTTGTGGTTGCAAATGCTGGTGATTCGCGATGTGTGATATCTCGGAAGGGTCAGGCATACAATTTGTCTAGAGACCACAAACCTGATCTTGAGATTGAGAAGGAAAGAATCTTAAAAGCTGGTGGTTTTATTCACGCTGGGCGAGTTAATGGAAGTTTAAATCTTGCAAGAGCTATTGGTGACATGGAATTTAAACAGAATAAATTTCTTCCTGCTGAGAAACAAATTTTAACTTCCAATCCAGACATAAACACTGTTGAGCTCTGTGACGAAGATGAATTTGTGGTGTTAGCTTGTGATGGCATATGGGATTGCATGTCAAGTCAACAACTCGTAGATTTTATTCATGAACAATTGCACTCGGAAACGAAACTTTCTGTTGTGTGTGAAAGAGTACTTGACCGGTGTTTGGCACCATCAACTGCCGTTGGCGAGGGATGTGACAATATGACCATGATCTTGGTGCAGTTCAAAAGACCTGCTCAGTCCAGTGCATCAACAGAAGAGCAATCCTCTTCAAACGGACAAGCTGAACCTGAAACACAACTAGAGAGAAGTGAAAGTTAG 1080 0.4222 MGIYLSTPKTEKFSADGESERLRYGLSSMQGWRATMEDAHAAYTDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQEVLKSEAYVTGDIGTSLQKSFLRMDEMMRGQRGWRELSILGDKINKITGMIEGLIWSPRSSDGIQVDDWAFEEGPHSDFAGPTSGSTACVAVIRNNQLVVANAGDSRCVISRKGQAYNLSRDHKPDLEIEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQILTSNPDINTVELCDEDEFVVLACDGIWDCMSSQQLVDFIHEQLHSETKLSVVCERVLDRCLAPSTAVGEGCDNMTMILVQFKRPAQSSASTEEQSSSNGQAEPETQLERSES 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00677 359 CDD PP2Cc 23 328 IPR001932 -
Phco7g00677 359 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Phco7g00677 359 PANTHER PROTEIN PHOSPHATASE 2C 19 327 IPR015655 GO:0004722|GO:0006470
Phco7g00677 359 Gene3D - 1 329 IPR036457 -
Phco7g00677 359 MobiDBLite consensus disorder prediction 331 352 - -
Phco7g00677 359 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Phco7g00677 359 SMART PP2C_4 13 326 IPR001932 -
Phco7g00677 359 MobiDBLite consensus disorder prediction 331 359 - -
Phco7g00677 359 FunFam probable protein phosphatase 2C 60 1 329 - -
Phco7g00677 359 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Phco7g00677 359 Pfam Protein phosphatase 2C 154 312 IPR001932 -
Phco7g00677 359 SUPERFAMILY PP2C-like 3 330 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00677 Phco-Chr7 5161201 5166853 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00677 7 5161201 5166853 Phco7g00677 7 5161201 5166853 ECH
Phco2g00477 2 4291017 4316877 Phco7g00677 7 5161201 5166853 PCT