Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00655 ATGCTAGAGTTTGGTGATGAAATTATACAAGAGAGGGAGGGTGGTGTCAACATCTATGCTGATATATATCATACATATATACTCACAATATTACCATCTCTCTTAATCATGGCGAGTGAACGTGATCTCTTCTCGGCGGAGATTGTGAACCGTGGGATTGAATCATCTGGACCAAACGCTGGCTCCTTGACCTTCTCTGTTAGGGTTAGGAGGCGTTTGCCAGATTTTCTTCAATCGGTGAACCTCAAGTACGTCAAATTGGGTTACCATTATCTCATAAACCATGGCATATACTTGTTGACCATACCCGTTCTTCTGGTGGTCTTCAGTGCTGAGGTTGGAAGCCTGAGCAAAGAGGACCTGTGGAAGAAGCTTTGGGAAGATGCGCGTTACGACCTTGCCACTGTTCTTGCTTCCTTTGGTGTCTTCGTCTTCACCTTGTCTGTTTACTTCATGTCACGCCCACGTCCCATTTACCTCATTGATTTTGCATGCTATAAACCCGATGATGAACTCAAGGTGTCAAGGGAGGAGTTGATGGAAGTAGCAAGAAAATCAGGGAAGTTCGACGAAGGGAGTCTCAACTTCCAAAAGAGGATGTTAATGTCCTCCGGCATCGGAGACGAGACCTACATCCCCAAAGCCGTCGTAGCCTCCACCGAGAACACCGCCACCATGAAGGAGGGTCGTGCAGAGGCCTCCATGGTCATGTTTGGTGCCCTGGACGAGCTCTTCGAGAAAACTCGCGTCCGCCCCAAGGACGTGGGCGTTCTGGTTGTCAACTGCAGCATCTTCAACCCCACTCCGTCGCTGTCTGCCATGATCATCAACCACTATAAGATGCGGGGGAACATCCTCAGCTACAACCTCGGGGGAATGGGGTGCAGTGCTGGGGTCATAGCCGTGGACTTGGCTAAGGATATTCTGCAAGCAAACCCTAATAACTACGCGGTGGTGGTGAGCACTGAGATGGTGGGGTACAACTGGTACCAGGGGAAGGACAGGTCCATGCTCATTCCTAACTGTTTCTTCCGAATGGGTTGCTCCGCCGTCATGCTCTCCAACCGCCGCCGGGACTACAGCCGCGCAAAGTACCGTCTTGAGCATATTGTTCGGACACATAAGGGTGCTGATGACCGTAGCTTCAGGTGTGTGTACCAAGAAGAAGATGAGCAAAAACTAAAGGGACTAAAGATCAGCAAAGACCTGATTGAGATTGGTGGTGATGCTCTAAAAACCAACATCACCACACTTGGACCCTTGGTGCTACCCTTTTCTGAGCAGCTTCTCTTCTTTGGCACCCTTGTGTGGAGGCACCTATTTGGGAGCAAAACTGATGGGAGTTCCCCATCAATGAAGAAGCCATACATTCCTGACTACAAACTGGCTTTTGAGCACTTTTGTGTGCATGCTGCAAGCAAGACCATTCTTGATGAGCTTCAAAGGAACTTGGAGCTGAGTGACAAGAACATTGAGGCTTCAAGAATGACACTGCACCGCTTTGGCAACACCTCTAGCAGCAGCATTTGGTATGAGTTGGCTTACATGGAAGCAAAGGAGAGTGTGAGAAGAGGGGACCGTGTTTGGCAACTTGCTTTTGGGTCTGGATTCAAGTGCAACAGTGTGGTGTGGCGTGCCATGCGTAGAGTCACTAAGCCTTCAAGGAACCCTTGGCTTGACTGCATCAACAGATATCCTGCACCTCTCAACTGA 1713 0.4939 MLEFGDEIIQEREGGVNIYADIYHTYILTILPSLLIMASERDLFSAEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHGIYLLTIPVLLVVFSAEVGSLSKEDLWKKLWEDARYDLATVLASFGVFVFTLSVYFMSRPRPIYLIDFACYKPDDELKVSREELMEVARKSGKFDEGSLNFQKRMLMSSGIGDETYIPKAVVASTENTATMKEGRAEASMVMFGALDELFEKTRVRPKDVGVLVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGVIAVDLAKDILQANPNNYAVVVSTEMVGYNWYQGKDRSMLIPNCFFRMGCSAVMLSNRRRDYSRAKYRLEHIVRTHKGADDRSFRCVYQEEDEQKLKGLKISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFGTLVWRHLFGSKTDGSSPSMKKPYIPDYKLAFEHFCVHAASKTILDELQRNLELSDKNIEASRMTLHRFGNTSSSSIWYELAYMEAKESVRRGDRVWQLAFGSGFKCNSVVWRAMRRVTKPSRNPWLDCINRYPAPLN 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00655 570 Gene3D - 162 546 IPR016039 GO:0016746
Phco7g00655 570 Pfam FAE1/Type III polyketide synthase-like protein 150 439 IPR013601 GO:0006633|GO:0016020|GO:0016747
Phco7g00655 570 Coils Coil 477 497 - -
Phco7g00655 570 CDD CHS_like 134 544 - -
Phco7g00655 570 PIRSF Very_long_ch_3-ktacl-CoA_syn 75 570 IPR012392 GO:0006633|GO:0016020|GO:0016747
Phco7g00655 570 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 465 545 IPR013747 -
Phco7g00655 570 FunFam 3-ketoacyl-CoA synthase 168 546 - -
Phco7g00655 570 SUPERFAMILY Thiolase-like 368 546 IPR016039 GO:0016746
Phco7g00655 570 PANTHER 3-KETOACYL-COA SYNTHASE 136 567 IPR012392 GO:0006633|GO:0016020|GO:0016747
Phco7g00655 570 SUPERFAMILY Thiolase-like 144 362 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00655 Phco-Chr7 5007939 5014187 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00655 7 5007939 5014187 Phco7g00655 7 5007939 5014187 ECH