Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00654 ATGGACATGGACACGGAGAAGCTTGCCATGTGTGGTGCTAGTGATTCTACGACTGAGCACAAGTCATACAAAGGGGTGAGAAAGAGAAAGTGGGGGAAATGGGTTTCTGAAATCAGACTTCCCAATAGCCGTGAACGCATATGGCTAGGGTCTTACGACTCTCCTGAAAAAGCAGCACGAGCCTTCGATGCTGCCCTTTTCTGTCTGCGTGGTCGCAATGCCAATTTCAACTTCCCCAACACTCCTTGCAGCATGGACACCAATGTGCCTCTGGCTGCTCCCCAATCTCTTACTCCACAGGAGATTCAAGAGGTCGCTGCCAAGTTTGCAAACGAGGACCCATTACCACAAGAATCCCAACGTGATGCTGCTGCTGCTGCTGATGGGAATTCTTCATCATTTGGAGCGATGTTGTGTAAATCTGACAGCATAGCAGGGAGTAGTTCTAGTACCAGCACCCCCACCGCCACTGCCTCGTCATGTTCTACTACTATGCATGAATGTGATGGAACGGTGCAAGTGGGCCATGGGGACATGGATTGGACATTCTTGAAAGAGTTTGATTACTCCAACGAAGTTTTTCCTGTTGGATCCGACTATGATCTCTATTTTGAGCTACACAAGATGCACTCAACTTCAGGTGAGTTATTGTATTCCACTCCACCTCCACCTCCTTTTGAAGGTTACCAAGAATTGATCGATGCCGAAGAAGATCCCTTTTCCCACCAATCATTCCTTTGGAATTGGAACTTTTGA 756 0.4775 MDMDTEKLAMCGASDSTTEHKSYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDSPEKAARAFDAALFCLRGRNANFNFPNTPCSMDTNVPLAAPQSLTPQEIQEVAAKFANEDPLPQESQRDAAAAADGNSSSFGAMLCKSDSIAGSSSSTSTPTATASSCSTTMHECDGTVQVGHGDMDWTFLKEFDYSNEVFPVGSDYDLYFELHKMHSTSGELLYSTPPPPPFEGYQELIDAEEDPFSHQSFLWNWNF 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00654 251 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Phco7g00654 251 MobiDBLite consensus disorder prediction 144 163 - -
Phco7g00654 251 CDD AP2 21 81 IPR001471 GO:0003700|GO:0006355
Phco7g00654 251 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 17 153 - -
Phco7g00654 251 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Phco7g00654 251 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Phco7g00654 251 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Phco7g00654 251 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
Phco7g00654 251 FunFam Ethylene-responsive transcription factor 2 21 80 - -
Phco7g00654 251 SUPERFAMILY DNA-binding domain 22 79 IPR016177 GO:0003677
Phco7g00654 251 Gene3D AP2/ERF domain 21 80 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00654 Phco-Chr7 4977198 4977953 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phco7g00654 AP2 2.6e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00654 7 4977198 4977953 Phco7g00654 7 4977198 4977953 ECH