Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00652 ATGGCAGCTCAAGACAAGTGGTGTGTGGTGACCGGAGGCAGAGGTTTCGCCGCTCGGCATTTGGTGGAAATGTTAATCCGGCACAACGAATACTGCGTTCGCATCGCCGATTTGGAAGACAACATTGTTCTCGAGCCCGCCGAACAGCTGGGGCTTCTCGGCCAGGCCTTGCACTCTGGCCGGGCCCAATACGTCTCCCTCGATCTTCGCAACAAGGCCCAAGTCCTAAAAGCATTAGAAGGAGTTGAGGTTGTTTTCCACATGGCTGCTCCAAACTCTTCCATTAACAATTACAAGCTTCATTATTCCGTTAATGTGCAAGGGACAAAGAATGTCATCGATGCTTGCGTGGAGCAGAAGGTGAAGCGACTCGTTTACACCAGCTCTCCCAGCGTGGTTTTTGATGGCGTTCATGGGATTCATAATGGTGACGAAACAATGCCTTATACACCTTCGCCTAATGATCATTACTCAGCTACGAAAGCTGAGGGTGAGACATTGGTTATTAAAGCTAATGGGACTAATGGGCTCCTAACGTGCTGCATACGCCCTAGCAGCATTTTTGGGCCCGGTGATAGACTGTTGGTGCCTACACTAGTTGATACTGCCAGAAAAGGGAAATCCAAGTTCCTTATTGGCGATGGCAATAACGTTTATGATTTCACATATGTTGAAAATGTGGCTCATGCCCATATATGTGCTGAACGAGCTCTGGATTCAGAAGGGCCAGTTTCAGAAAAAGCTGCTGGAGAGGCATATTTCATAACAAATATGGAGCCTATGAAATTTTGGGAGTTTGTGTCAGTGGTATTGGATGGTCTTGGATATGAAAGGCCAAGAATAAAGATCCCTGCTGCTGTTATCTTGCCCATTGCGCATTTGGTGGAGTGGATATATAGGCTGCTTGGCCCATATGGGATGAAGGTGCCTCAGTTAACCCCTTCAAGGATAAGACTCACGACCTGCAGCAGAACTTTTGATTGCTCAAAAGCAAAGGATCGTCTTGGCTATGCACCCATCGTAACAATGCAGGAGGGCCTGCGGAGGACAATTGAATCATATGCACACTTGAAGGCAGAAAATCAACCTAAAACTAAAAGAGAAGGTCCCTCAAAAGCTTCCAAATATCTTGGAAGTGGAAGAGTTGCTGACACATTGCTTTGGAAGGATAAAAAGCAAACTCTCATCACCTTGTTAGTTTTGATTGCAATATACTTCAACTTCCTTGCATCAGAACATACCATCATCAGTGCTCTGACAAAGCTTCTATTGTTCGCATCTATCTTTTTATTCATTCATGGCATTCTACCTACAAAAATGTTGGGGTATACTGTTGAGAAAATGCCAAAATCATGGTTTCACTTGTCAGAAGATATGTCACGTAAATTTGCTCTCTCAGTGGCCTCGTTATGGAATATTGCTGTGAGTGTTTTGAAGTCCCTTGCAGAAGGGAATGATTGGGTGCTATTATTAAAGGTTGTTGTCTCTCTGTTCATTCTTAGCTTCCTTGGAGCCTTCTCACTTCAGAACTTGTATACTATAGGAGTTACATTTGCATTTATAGCTTTCTACGTGTACGAACAGAAGGAGGAAGACATTGATGGCATATTTATAAAAACACGTTCTTTTAGTAGCAAATTGAAATCTGATCTCACCAAAAAGTTTCTTTCTTCAAAGAAGATTGATTGA 1689 0.4364 MAAQDKWCVVTGGRGFAARHLVEMLIRHNEYCVRIADLEDNIVLEPAEQLGLLGQALHSGRAQYVSLDLRNKAQVLKALEGVEVVFHMAAPNSSINNYKLHYSVNVQGTKNVIDACVEQKVKRLVYTSSPSVVFDGVHGIHNGDETMPYTPSPNDHYSATKAEGETLVIKANGTNGLLTCCIRPSSIFGPGDRLLVPTLVDTARKGKSKFLIGDGNNVYDFTYVENVAHAHICAERALDSEGPVSEKAAGEAYFITNMEPMKFWEFVSVVLDGLGYERPRIKIPAAVILPIAHLVEWIYRLLGPYGMKVPQLTPSRIRLTTCSRTFDCSKAKDRLGYAPIVTMQEGLRRTIESYAHLKAENQPKTKREGPSKASKYLGSGRVADTLLWKDKKQTLITLLVLIAIYFNFLASEHTIISALTKLLLFASIFLFIHGILPTKMLGYTVEKMPKSWFHLSEDMSRKFALSVASLWNIAVSVLKSLAEGNDWVLLLKVVVSLFILSFLGAFSLQNLYTIGVTFAFIAFYVYEQKEEDIDGIFIKTRSFSSKLKSDLTKKFLSSKKID 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00652 562 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 8 355 - -
Phco7g00652 562 ProSiteProfiles Reticulon domain profile. 382 562 IPR003388 -
Phco7g00652 562 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 355 IPR036291 -
Phco7g00652 562 Pfam Reticulon 382 537 IPR003388 -
Phco7g00652 562 Gene3D - 1 359 - -
Phco7g00652 562 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 9 283 IPR002225 GO:0003854|GO:0006694|GO:0016616
Phco7g00652 562 FunFam Reticulon-like protein 1 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00652 Phco-Chr7 4954409 4960341 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00652 7 4954409 4960341 Phco7g00652 7 4954409 4960341 ECH