Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00643 ATGAACTTATCCAAGAAAGGATCCCAAACGGATGCAAAGCTATTAAGCCCAAACAAGGCAACAACTCTGAATCCAAATGCAGCAGAGTTTATTCCTCTAGCCCTCAGATCATCATCATTATCTGGAACTACCAGCTCGGTAGATGCAACAGCAGGGCTTACCGCTGCTGGAGCTCTTGGGAAAGCAATTTTAGATAGATCAGAATCATCCATTTCAAATAATTCTGATGATGAGGTGCACCAATTCTGGCGATGTCAGCTCCCTGATGATATTACCCCTGATTTCAAGGTCATGGGAGAAGATGAATCTCAAGGTCTAGACGATCTTCCTTTAGCAGGTTTATCCATTCTTGAGGACAGTGAGGCCTCCAGGTTTCCTTCTTCCAAAGGAAGTAAATATATAATAAATGAGCTGGAGGAAATATCTCAACCGCATAATAATGGCAATAGCTTTGCAGATAAAATAGGATTTTCCCATTCAAGCTACAGGGAGGACCCGTCTTCTACAAGCTTTTTGAATGCTATGGCAAAGCCTTGGGAGGGGCCAATTGGGAGTGCTGAGCAGCGTATTAGCAGTGGTCAAGAGGGGTTTGCTTATGATGACAACACTAGACATGGATACTTAAATGATGTTTTGGCTGAAAATGCAATTATGGATGATACTGATTTGAATCCTTTGGAGTTTTTAGCTTCTCTGTTCCCTGGTTTTGCAGCAGAAAGCCTCGCAGAAGCTTACTTTGCCAATGGATGTGATTTACATTTGACCACTGAGATGCTCAGTCAGTTAGAGCTTCAAGTTGATGGTGGTTTCAATCAAAATCTGAATTCAAAGACTCTGTCAGCTCCCAACCTCAGTGCAATGGAGTTTCCTGCACTTACTTCACCAGATGGCCAGGCTGCTTCAGTTAAATATGTGGTTGACAGTGTCCAGCAAAGTGGAAATCTTTACCAGTCATTTGACAGTGATGTTATGCTTTTCAAATCTAGCCCTTCAGTTCCATCTAGAGGTGCTGTTGACTTTGCTTCCGCTGTTAGAAAGTTGGCTTCTCAGGATTCTGGTGGTATTTGGAAGTATGACAAGAATGGCTCTGGTGATGCTGCTATAGGTTCAAGTAGGAATTCAAATGTTTTGGGTAGTGGCTACAATGGTGGACAGGCGAGAGCACACTTTGGTGATCGATTGCAGAACCGTGGTTCAGCTCGAGCAGCTCCTATTTGGCTTGAAACCGGTGATGCCGTTGCAAATATGTATTCAGAGCTGCGGGAAGAGGCTCGTGATCATGCATGCTTACGCAATGCATATTTTGAGCAGGCTCGTCAAGCTTATCTTATTGGTAATAAAGCCCTAGCAAAGGAACTTAGTGCTAAAGGGCAACTTCACAACATGCATATGAAGGCAGCTCACGGAAAAGCTCAAGAATCCATCTACCGTCAGAGAAATCAAGTTGCTTCAGAGATGCAGGGCAATGGAAGAGGACACGAGAGGATAATAGACCTACATGGGTTGCATGCGAGTGAAGCCATTCATGTGCTGAAACATGAGTTGAGTGTGCTGAAAAGCACTGCCATAGCTGCTGAGCAGCGTTTGCAGGTGTATATTTGTGTGGGCACAGGTCATCACACTAGGGGTTCCCGCACTCCTGCAAGACTTCCAATAGCTGTACAGCGTTTTCTTCTTGAAGAGGGCATTGATTTCACGGAACCTCAGCCAGGCCTACTTCGCGTTGTGATATATTGA 1737 0.4444 MNLSKKGSQTDAKLLSPNKATTLNPNAAEFIPLALRSSSLSGTTSSVDATAGLTAAGALGKAILDRSESSISNNSDDEVHQFWRCQLPDDITPDFKVMGEDESQGLDDLPLAGLSILEDSEASRFPSSKGSKYIINELEEISQPHNNGNSFADKIGFSHSSYREDPSSTSFLNAMAKPWEGPIGSAEQRISSGQEGFAYDDNTRHGYLNDVLAENAIMDDTDLNPLEFLASLFPGFAAESLAEAYFANGCDLHLTTEMLSQLELQVDGGFNQNLNSKTLSAPNLSAMEFPALTSPDGQAASVKYVVDSVQQSGNLYQSFDSDVMLFKSSPSVPSRGAVDFASAVRKLASQDSGGIWKYDKNGSGDAAIGSSRNSNVLGSGYNGGQARAHFGDRLQNRGSARAAPIWLETGDAVANMYSELREEARDHACLRNAYFEQARQAYLIGNKALAKELSAKGQLHNMHMKAAHGKAQESIYRQRNQVASEMQGNGRGHERIIDLHGLHASEAIHVLKHELSVLKSTAIAAEQRLQVYICVGTGHHTRGSRTPARLPIAVQRFLLEEGIDFTEPQPGLLRVVIY 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00643 578 MobiDBLite consensus disorder prediction 1 21 - -
Phco7g00643 578 Pfam Domain of unknown function (DUF1771) 417 480 IPR013899 -
Phco7g00643 578 SMART DUF1771_2 416 481 IPR013899 -
Phco7g00643 578 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 578 - -
Phco7g00643 578 CDD CUE_CID7_like 223 265 IPR041806 -
Phco7g00643 578 Gene3D - 464 577 IPR036063 -
Phco7g00643 578 SMART SMR_2 494 578 IPR002625 -
Phco7g00643 578 SUPERFAMILY SMR domain-like 495 576 IPR036063 -
Phco7g00643 578 ProSiteProfiles Smr domain profile. 497 578 IPR002625 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00643 Phco-Chr7 4884234 4889137 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00643 7 4884234 4889137 Phco7g00643 7 4884234 4889137 ECH