Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00637 ATGTTGTTGGAGTTGAGAGTGGCAGGCGGAGAGAGAAAGAGGCTTCGCCTCACACTTCACACTTCACTCTTAACGTATCCGCCAAATCAAGGGGCATATTCCACCTCCACATCTCTAGTTTTGCTTCTTTTCGGTTTTTTAACAGTTGATTTTTTGTACCATCTTCGACTGTATTCTCTTTCTGGTGAAAACTTTGATGATGGGGTGGTTGTACCCTGCATGCCGCTCTTGCCTTTTCATGGTACTTCTACTGCTAAACTCTCATTCTTCGTGCGGAGGTGCATCTTCTTGGTTACAGAAAATATGGGCTTAGTCTGCAGCAAAAGGCGACGTTTTCGTGATGCTGATGCTGAAGAAAATGCTCAGGATGCCGAAATTGAAAGGAGAATCGAGTTAGAAACAACGGCTGAAAAGCATATTCAGAAACTTCTACTATTAGGTGCTGGAGAGTCTGGGAAGTCTACAATCTTTAAGCAGATAAAACTTTTGTTTCAAACTGGCTTTGACGATGCTGAGCTAAAAAGCTACATACCAGTCATTCATGCTAATGTGTATCAGACAATAAAAGTACTGCATGATGGGTCAAAAGAGTTGGCGCAGAATGATGCTGATCCTTCAAAGTACGTGATATCTAATGAAAACCAGGACATTGGTGAAAAGCTCTCAGAAATAGGAGGAAGGCTAGATTACCCACGTCTTACCAAGGAGCTTGCTCAGGAAATAGAGACTCTGTGGGAGGATGCTGCAATTCAGGAAACATATGCCCGTGCTAATGAACTCCAAGTTCCAGATTGTACTCATTATTTCATGGAAAATTTGGAGAGGCTGTCTGATGCAAATTATGTTCCGACAAAGGAGGATGTTTTGTATGCAAGAGTTCGTACAACTGGCGTTGTCGAGATCCAATTCAGTCCTGTTGGAGAAAATAAGAGAAGTGGTGAAGTCTATAGACTCTTTGATGTTGGTGGCCAGAGAAATGAGAGGAGAAAGTGGATCCATCTTTTCGAAGGAGTTACAGCTGTAATATTCTGTGCTGCAATTAGCGAGTATGATCAAACACTTTATGAGGATGAAAACAAGAACAGAATGATGGAGACTAAGGAACTTTTTGAGTGGGTCCTAAAGCAACCGTGTTTTGAGAAAACATCCTTCATGTTATTTTTAAACAAGTTTGACATATTTGAAAAGAAGATCCTGAAAGTTCCGCTCAATGTATGTGAGTGGTTCAAAGAATACCAGCCAGTTTCAACAGGAAAGCAAGAGATTGAACATGCGTACGAGTTTGTGAAGAAGAAGTTTGAGGAATTGTATTTCCAGAGCATTGCTCCTGATCACGTGGATCGTGTTTTCAAGATCTACCGGACCACTGCCCTTGATCAGAAGCTTGTGAAGAAGACTTTCAAGCTTGTTGACGAGACTTTGAGACGGAGGAATCTCTTTGAAGCTGGCTTATTATGA 1458 0.4163 MLLELRVAGGERKRLRLTLHTSLLTYPPNQGAYSTSTSLVLLLFGFLTVDFLYHLRLYSLSGENFDDGVVVPCMPLLPFHGTSTAKLSFFVRRCIFLVTENMGLVCSKRRRFRDADAEENAQDAEIERRIELETTAEKHIQKLLLLGAGESGKSTIFKQIKLLFQTGFDDAELKSYIPVIHANVYQTIKVLHDGSKELAQNDADPSKYVISNENQDIGEKLSEIGGRLDYPRLTKELAQEIETLWEDAAIQETYARANELQVPDCTHYFMENLERLSDANYVPTKEDVLYARVRTTGVVEIQFSPVGENKRSGEVYRLFDVGGQRNERRKWIHLFEGVTAVIFCAAISEYDQTLYEDENKNRMMETKELFEWVLKQPCFEKTSFMLFLNKFDIFEKKILKVPLNVCEWFKEYQPVSTGKQEIEHAYEFVKKKFEELYFQSIAPDHVDRVFKIYRTTALDQKLVKKTFKLVDETLRRRNLFEAGLL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00637 485 FunFam Guanine nucleotide-binding protein alpha-1 subunit 169 294 - -
Phco7g00637 485 PRINTS Plant G protein alpha subunit signature 301 316 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Phco7g00637 485 PRINTS Plant G protein alpha subunit signature 420 435 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Phco7g00637 485 PRINTS Plant G protein alpha subunit signature 437 449 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Phco7g00637 485 PRINTS Plant G protein alpha subunit signature 178 191 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Phco7g00637 485 PRINTS Plant G protein alpha subunit signature 217 231 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Phco7g00637 485 PRINTS Plant G protein alpha subunit signature 371 382 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Phco7g00637 485 PRINTS Plant G protein alpha subunit signature 193 207 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Phco7g00637 485 PRINTS Plant G protein alpha subunit signature 128 137 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Phco7g00637 485 CDD G-alpha 141 479 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Phco7g00637 485 Gene3D - 169 294 IPR011025 GO:0007165
Phco7g00637 485 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 482 IPR027417 -
Phco7g00637 485 SMART galpha_1 120 484 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Phco7g00637 485 Pfam G-protein alpha subunit 123 473 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Phco7g00637 485 ProSiteProfiles G-alpha domain profile. 139 485 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Phco7g00637 485 SUPERFAMILY Transducin (alpha subunit), insertion domain 168 293 IPR011025 GO:0007165
Phco7g00637 485 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 111 481 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Phco7g00637 485 FunFam Guanine nucleotide-binding protein alpha-1 subunit 279 472 - -
Phco7g00637 485 Gene3D - 142 473 IPR027417 -
Phco7g00637 485 PRINTS Alpha G protein (transducin) signature 338 366 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Phco7g00637 485 PRINTS Alpha G protein (transducin) signature 384 393 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Phco7g00637 485 PRINTS Alpha G protein (transducin) signature 281 303 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Phco7g00637 485 PRINTS Alpha G protein (transducin) signature 142 157 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Phco7g00637 485 PRINTS Alpha G protein (transducin) signature 316 333 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00637 Phco-Chr7 4842989 4848539 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00637 7 4842989 4848539 Phco7g00637 7 4842989 4848539 ECH