Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00633 ATGGCTTCTCGTTTCGTCACACTTCCTCTCGCCTCGCAACCCAAGCTCTGCTTCAATTACACGCCCAACCATGCTGTCCAATTCATTTCTCCGGCCAAAAGACGTCGCAATCGCAACCGCAACCGCCACAGCCATGAGATTCTCCGTCCATCATTCGCAGTATCCAGTTCCCTTCGGACCGAGATTGGCTCACCGGAATCAGCTCTTATCCAAGTCCAGAGAGAGAGAAAAGACTTGCTGGTTCTGCTTGACGTCACCGGCATGATGTGCGGTGCGTGCGTCTCCCGAGTCAAAAATATCCTGTCCGCTGACGAACGAGTCGACTCGGTCGTGGTCAACATGCTGACCGAGACCGCCGCTGTTAATCTGCGCAGGATCGAGGAGGAACCGGCCAGCGTCGCCGAGAGCCTCGCACGGAGACTGGGCGACTGCGGATTTCCGACGAAGCGGAGAGCGTCGAGTTCTGGAGTGACTGAAAACGTGAGGAAGTGGAAGGAATTGGTGAAGAAGAAGGAGGAATTGGTCGGGAAGAGTCGAAGCCGCGTCGCGTTCGCCTGGACATTGGTTGCATTGTGTTGTGGATCGCACGCTTCGCATATCTTTCACTCTTTGGGGATCCACATTGCTCATGGATCGCTTTGGGAGATTCTTCATAGTTCGTACGTGAAAGGTGGTTTGGCTTTGGGGGCTCTATTGGGTCCAGGACGAGAGTTACTCTTTGATGGCCTAAATGCATTTAAGAAGGGGTCGCCTAATATGAACTCTCTCGTGGGATTTGGTTCTATAGCTGCCTTCATCATTAGTTCCATCCCGCTACTTAACCCCGGCCTAGCATGGGATGCATCATTCTTTGATGAACCGGTCATGCTTCTTGGTATCGTGCTTCTAGGACGTTCTCTTGAGGAAAAGGCAAGGATCCAGGCATCTAGCGATATGAATGAACTGCTTTCACTTGTATCTACTCAGTCAAGACTTGTGATTACTTCAACCGAAGGTTCACCTTCTACTGACGCTGTGCTTTGCTCTGATGCAATTTGTGTTGAAGTCCCAACTGATGATATTCGAGTAGGTGATTCTGTGTTGGTGTTGCCTGGAGAGACTATTCCTATAGATGGAAAGGTTATTTCAGGAAGAAGTGTTGTAGATGAAGCCATGCTTACAGGGGAATCACTTCCTGTATTTAAGGAGAAAGGCCTCACAGTTTCAGCAGGAACTATAAATTGGGATGGTCCTTTAAGGATTGAAGCTTCTTCAACTGGTTCCAACACTACAATATCGAAGATTGTACGCATGGTTGAGGAGGCTCAATCACGTGAAGCACCTGTACAAAGGCTTGCAGATTCAATAGCAGGGCCATTTGTATATAGTGTAATGACTCTGTCAGCAGCAACATTTGCATTTTGGTATTTTGTTGGATCACAGATATTTCCTGATGTTTTGCTCAATGATATTGCGGGCCCAGGAGGAGATCCTTTGCTCTTGAGTTTAAAACTGTCTGTAGATGTTTTGGTTGTTTCTTGTCCTTGTGCATTGGGTCTTGCTACGCCCACAGCTATCCTGGTTGGAACCTCACTTGGGGCAAGAAAAGGACTTCTTATTAGGGGAGGAGATGTGCTAGAACGCTTGGCCAAAATAAATTATATTGCTCTAGACAAGACAGGAACCCTGACGAAAGGAAAACCAGTTGTGTTGGCCATAGGCTCTATCCATTATGGAGAGTCTGAAATTCTTCGGATTGCTGCTGCGGTGGAGAAGACTGCATCTCACCCAATAGCAAAGGCTATTACCGATAAAGCTGAGTCATTGGAGTTGATCCTTCCTGTCACAAAGAGACAGTTAGTTGAACCAGGTTTTGGTACTTTAGCAGAAGTAGATGGGCATTTGATTGCAGTTGGGTCTTTGGAATGGGTTCATCAACGCTTCCAAACAAGAGTGAATCCGTCTGATTTGAAAAATCTCGAACATAGTTTGATGAATCATTCATCGAATACAACATCTTCTAAGTATTCGAAAACTGTTGTCTATGTTGGACGTGAAGGAGAAGGCGTCATTGGTGCTATTGCCATATCTGACACCGTGCGTGAAGATGCTGAATCTACTGTAATGAGGCTCAAGCAGAAGGGGATTAAAACGGTCCTCTTGTCAGGAGATAGGGAAGAGGCAGTTGCAACAGTAGCAGATACAGTTGGAATTGAAAATGATTTTGTCAAAGCATCTTTGTCTCCGCAACAGAAGTCTAGTTTTATTTCCTCTCTAAAAGCTGCAGGACATCATGTTGCGATGGTAGGTGATGGGATAAATGATGCACCCTCTTTGGCTGTAGCTGATGTTGGAATTGCTCTGCAGAATGAAGCTCAAGAGAATGCTGCCTCGGATGCAGCATCTATTATACTTCTAGGGAACAAAATTTCACAAGTTGTCGATGCGCTAGACCTAGCACAGGCAACAATGGCAAAAGTGTACCAGAATTTGTCTTGGGCGGTCGCGTATAATGCTGTTGCCATTCCCATTGCGGCTGGTGTGTTACTTCCCCAATTTGACTTTGCTATGACACCATCACTCTCAGGAGGACTGATGGCTCTGAGCTCCATCTTCGTGGTTGGCAACTCACTGCTTCTACAGCTTCATGGGTCTCAGATCTCTAGAAAGGGTTAG 2655 0.4685 MASRFVTLPLASQPKLCFNYTPNHAVQFISPAKRRRNRNRNRHSHEILRPSFAVSSSLRTEIGSPESALIQVQRERKDLLVLLDVTGMMCGACVSRVKNILSADERVDSVVVNMLTETAAVNLRRIEEEPASVAESLARRLGDCGFPTKRRASSSGVTENVRKWKELVKKKEELVGKSRSRVAFAWTLVALCCGSHASHIFHSLGIHIAHGSLWEILHSSYVKGGLALGALLGPGRELLFDGLNAFKKGSPNMNSLVGFGSIAAFIISSIPLLNPGLAWDASFFDEPVMLLGIVLLGRSLEEKARIQASSDMNELLSLVSTQSRLVITSTEGSPSTDAVLCSDAICVEVPTDDIRVGDSVLVLPGETIPIDGKVISGRSVVDEAMLTGESLPVFKEKGLTVSAGTINWDGPLRIEASSTGSNTTISKIVRMVEEAQSREAPVQRLADSIAGPFVYSVMTLSAATFAFWYFVGSQIFPDVLLNDIAGPGGDPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGARKGLLIRGGDVLERLAKINYIALDKTGTLTKGKPVVLAIGSIHYGESEILRIAAAVEKTASHPIAKAITDKAESLELILPVTKRQLVEPGFGTLAEVDGHLIAVGSLEWVHQRFQTRVNPSDLKNLEHSLMNHSSNTTSSKYSKTVVYVGREGEGVIGAIAISDTVREDAESTVMRLKQKGIKTVLLSGDREEAVATVADTVGIENDFVKASLSPQQKSSFISSLKAAGHHVAMVGDGINDAPSLAVADVGIALQNEAQENAASDAASIILLGNKISQVVDALDLAQATMAKVYQNLSWAVAYNAVAIPIAAGVLLPQFDFAMTPSLSGGLMALSSIFVVGNSLLLQLHGSQISRKG 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00633 884 ProSitePatterns E1-E2 ATPases phosphorylation site. 551 557 IPR018303 -
Phco7g00633 884 SUPERFAMILY Calcium ATPase, transduction domain A 339 432 IPR008250 -
Phco7g00633 884 SFLD p-type atpase 532 815 IPR044492 -
Phco7g00633 884 NCBIfam HAD-IC family P-type ATPase 339 854 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phco7g00633 884 SUPERFAMILY HMA, heavy metal-associated domain 81 124 IPR036163 GO:0046872
Phco7g00633 884 CDD P-type_ATPase_HM 181 872 - -
Phco7g00633 884 Gene3D - 560 693 IPR023299 GO:0000166
Phco7g00633 884 SFLD Haloacid Dehalogenase 532 815 - -
Phco7g00633 884 CDD HMA 83 147 IPR006121 GO:0046872
Phco7g00633 884 NCBIfam heavy metal translocating P-type ATPase 253 873 IPR027256 GO:0006812|GO:0016020|GO:0019829
Phco7g00633 884 FunFam Copper-transporting ATPase PAA2, chloroplastic 560 693 - -
Phco7g00633 884 PANTHER ATP7, ISOFORM B 76 875 - -
Phco7g00633 884 Pfam Heavy-metal-associated domain 83 146 IPR006121 GO:0046872
Phco7g00633 884 Pfam haloacid dehalogenase-like hydrolase 545 776 - -
Phco7g00633 884 FunFam Copper-transporting ATPase 1, putative 305 436 - -
Phco7g00633 884 Pfam E1-E2 ATPase 342 529 - -
Phco7g00633 884 Gene3D - 305 436 - -
Phco7g00633 884 PRINTS P-type cation-transporting ATPase superfamily signature 762 781 - -
Phco7g00633 884 PRINTS P-type cation-transporting ATPase superfamily signature 549 563 - -
Phco7g00633 884 PRINTS P-type cation-transporting ATPase superfamily signature 685 696 - -
Phco7g00633 884 PRINTS P-type cation-transporting ATPase superfamily signature 382 396 - -
Phco7g00633 884 PRINTS P-type cation-transporting ATPase superfamily signature 707 717 - -
Phco7g00633 884 SUPERFAMILY HAD-like 547 870 IPR036412 -
Phco7g00633 884 Gene3D - 80 151 - -
Phco7g00633 884 SUPERFAMILY Calcium ATPase, transmembrane domain M 283 543 IPR023298 -
Phco7g00633 884 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 551 646 IPR023299 GO:0000166
Phco7g00633 884 Gene3D - 540 813 IPR023214 -
Phco7g00633 884 ProSiteProfiles Heavy-metal-associated domain profile. 79 149 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00633 Phco-Chr7 4782641 4790952 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00633 7 4782641 4790952 Phco7g00633 7 4782641 4790952 ECH