Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00627 ATGAATCCAAAAAAACCCACTAGTGCTTTTTTAATTATTAAAAAAATCCAAATAAATCCAAATCAGCCACTATTTAATGCCGAACTTCACCTGGAAGAAGAAACAGCAGAAGAACTACACTTATCAGCTTATGCAAATTTTGTTTCCTCACAACAAATAACTTCCTCAGTGCCCAAGATGCTAGCTTATTTGGAACACTTCGTTCACGAAAAAGATGCTGAATCGAGGCAAGAGGAAGAAGTTACCAGCCTCTCCAGAGCGCTTGAACTTCAAGCCAGTATCGACGAATTGGGTCCCACCGGAATCGCCAGTAGGGATTTCGGCGGCATCAAGTCCGTCAAACCCTTGGCCATGATCAGGCCTTCCTCGGCCGTCGACGTGGCCAGAGTGGTGAAAGCCGTGGCGGCGTCTCCGAGTCTGACGGTGGCGGCGCGGGGGAACGGGCACTCAGTGAACGGGCAGGCCATGGCGGAGAAGGGACTGGTCCTCGACATGCGCGCCTTGGAGGAGCCTTTTGAGATTCTCTGGATAGAAGGCACGGCCTACCTGGAAGTTTCGGGAGGGGCATTATGGGAAGACGTCCTTAAACGCTGCGTTTCGGAGGTTGGACTGGCCCCGAGGTCGTGGACGGATTATCTCGGTTTAACAGTTGGTGGAACGCTGTCCTACGCAGGCGTCAGCGGCCAAACCTTCCGTTACGGTCCTCAGACATCCAACGTAATGGAATTGGAAGTTGTAACAGGCAAAGGCGAAACGCTGTGCTGCTCCCTGACACAAAACTCTGAACTTTTCTTTGGTGCGCTCGGTGGCTTAGGACAGTTCGGTATTATTACAAGGGCCAGGGTCGTTCTTCAACAGGCTCCAGAAATGGTGAGGTGGATAAGAGTGGTTTACTCTGAATTTGAGGAGTATGCTGGCGATGCAGAGTTGCTGGTGGAGGAAGTAGAGGAATGTTTTGATTACGTGGAAGGGTTCGTTCTGGTGAACAGTGATGACCCGGCCAATGGATGGCCCACCGTGCCATTGGAACCGGAACAAGTGTTCGACCCGGTTCATATTCCTTCCACTGCTGGCCCTGTTTTGTATTGCTTGGAGTTGGGTCTTCACTATGGTAACGCGGATCATTCTCACCGTGCTCGTGTTGATATGGATGTGGATCGATTGCTCGGACGGCTGCGATTCATTCAGGGTCTCAAGTTCCAGACGGATGTGACCTACACAGAGTTTTTGCTACGTGTAAAGCGTGTGGAGGAGGACGCAAAAGCCAGCGGCACCTGGGATGCACCTCACCCTTGGCTCAACCTCTTTGTGTCCAAGTCCAACATTGTTGATTTTGATCGTGAGGTGTTCAAGAAGATTCTCAAGGACGGGGTCGATGGCCCCATTTTAGTCTACCCGCTCTTGCGAACCAAGTGGGATAATCGTCACTCAGTGGTGGTGCCTGACAGTGACATCTTCTACATAGTAGCGTTGCTCCGATTCAGCCCACCAGCTCCAAAGGGTCCACCAGCTGAACTCTTGGTGGCGCAAAACAATGAGATTATTCAATTCTGCACAAGCAGAGGCCTTGATTTCAAGCTATACTTTCCCAATTACCAGTCACGGGAGGATTGGATGAAACACTTCGGGAAACAATGGACCAGATTTGTGGAACGAAAGGCCAGTTTTGATCCCTTGGCTATCCTTGCACCAGGACAGAGAATTTTCTCCAGAACATCTCAACCTCCTTCTATCACATAA 1740 0.5034 MNPKKPTSAFLIIKKIQINPNQPLFNAELHLEEETAEELHLSAYANFVSSQQITSSVPKMLAYLEHFVHEKDAESRQEEEVTSLSRALELQASIDELGPTGIASRDFGGIKSVKPLAMIRPSSAVDVARVVKAVAASPSLTVAARGNGHSVNGQAMAEKGLVLDMRALEEPFEILWIEGTAYLEVSGGALWEDVLKRCVSEVGLAPRSWTDYLGLTVGGTLSYAGVSGQTFRYGPQTSNVMELEVVTGKGETLCCSLTQNSELFFGALGGLGQFGIITRARVVLQQAPEMVRWIRVVYSEFEEYAGDAELLVEEVEECFDYVEGFVLVNSDDPANGWPTVPLEPEQVFDPVHIPSTAGPVLYCLELGLHYGNADHSHRARVDMDVDRLLGRLRFIQGLKFQTDVTYTEFLLRVKRVEEDAKASGTWDAPHPWLNLFVSKSNIVDFDREVFKKILKDGVDGPILVYPLLRTKWDNRHSVVVPDSDIFYIVALLRFSPPAPKGPPAELLVAQNNEIIQFCTSRGLDFKLYFPNYQSREDWMKHFGKQWTRFVERKASFDPLAILAPGQRIFSRTSQPPSIT 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00627 579 Pfam FAD binding domain 115 255 IPR006094 GO:0050660
Phco7g00627 579 SUPERFAMILY FAD-linked oxidases, C-terminal domain 288 569 IPR016164 GO:0003824|GO:0050660
Phco7g00627 579 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 288 569 IPR015345 GO:0009690|GO:0019139|GO:0050660
Phco7g00627 579 SUPERFAMILY FAD-binding/transporter-associated domain-like 103 284 IPR036318 GO:0050660
Phco7g00627 579 Gene3D - 291 528 IPR016170 -
Phco7g00627 579 Gene3D - 103 570 IPR016167 -
Phco7g00627 579 ProSiteProfiles PCMH-type FAD-binding domain profile. 111 287 IPR016166 GO:0071949
Phco7g00627 579 Gene3D - 165 289 IPR016169 -
Phco7g00627 579 PANTHER GULONOLACTONE OXIDASE 88 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00627 Phco-Chr7 4748993 4752798 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00627 7 4748993 4752798 Phco7g00627 7 4748993 4752798 ECH