Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00623 ATGGATGCCAATTATGAGAAGCAAGGTCTGCAAGGCGGCGAAGTGAGCATGGCTGAGAAGAAAAGGGAAGTGATGGTGGCGATTCCAAATGAGGGTGGTGGTGAATCTTTGATGGCGCACAGAATGTTAAACGACAACGAGGTTGCTGCAAAGTCGCCACCTTTGAACTGTGCTTCCCCTGAGATAAGGTTCATGCCAAGCCCAAACAAGCCCCCAAAGGTTCCCACTTCCAACGCCAATCTCACCCGGAGAAAATCACTCACAAGGTCAGTGTATTCCAAACCCAAATCAAGGTTTGGTGAACAACCTTACCCTGTTGATGGTACCCTTTTGGAAGAGAATGGTACCTCAACTTTGCAAGAAAATTTGAGTGTTGGTTCACCATATAAAGCATCGCCTATTAACAATAAACCCGGAACTGTTAATAGAACAGTCTCCATCCTTTCTGTGATCACTCCCAAGACGCCGTTGATGGCGTCTCCCGGGCCGGCTGGTGGGGAGGATTTCGATGAAATCATTTACAGAAAAGTTGAATTGAGTAAAAGCAAACGCAGTAGGAGAGTGACAGCTAAAGTTTTGTTTGAATGGTTTGTTTTTGTGTGCATTACAAGTAGCTTGGTGGCTAGTTTAACAGTTGGAAAACTTAGAAGGACAGAGATTTGGGGTTTGGGGATTTGGAGGTGGTGTGTGCTTGTGTTGGCGACCTTTTGTGGCATGTTGGTTACCAGATGGTTCATGCTCATTATTGTTTTCTTGATTGAGACCAACTTTTTGTTGAGGAAAAAGGTGCTGTATTTTGTCCATGGACTGAAGAAGTGTGTCCAGTTCTTCATTTGGCTTGGTTTGGTTCTTCTTACATGGGTGCTGTTGATTAACCGGGGGGTGCACCGATCTGAATTGGCCACAAAGATTTTGAATGGGGTAACATGGACTCTTGTTTCCATCCTCATTGGAGCATTCCTGTGGTTCGTGAAGACATTGTTGCTGAAGATTTTGGCGTCAAACTTTCATGTTAAATCTTTCTTTGATCGAATTCAAGAATCGCTATTCCATCAGTACATTCTGCAGACTCTTTCTGGGCCTCCACTTGTAGAAGAGGCTGAGAAGGTTGGGGCATCCCTCAGTGTTGGTCACTTTAGTTTCAGGAGTACTGATGGTAAGGGGGGAATGAAGAAAGAGACTATTGATATTGCGAAGCTTCACCAGATGAAACAAGAGAAGGTTTCTGCGTGGACTATGAAGGTCTTGATAGATGCAATGACAAATTCAGGGCTGTCCACAATCTCTAGTGCACTAGATGAAAGTTTTGATGACGGAGAAAATGAACAGACTGATAAAGAGATTACTAATGAGATGGAAGCAATTGCTGCAGCCTATTACATTTTCAGGAATGTTGCTGCCCCTGGTTGCACGTACATTGATGAGGATGAACTACGAAGGTTCATGATTAAGGAAGAAGTGCGGATGGTATATCCCTTACTGGCTGAAGCAGAAACGGGGCAGATTACCAGGAAGTCCTTAACAGACTGGTTGTTGAAGGTATATCAGGAACGCAAAGCATTGGCACATGCCTTAAGCGACACCAAAACTGCTGTGAGACAACTAAACAAGCTCGTGACAGTAATCCTAATAGTGGTAAACATAATTGTGTGGCTTCTACTAATGGAGATTGCAACAACAAAAGTACTTGTATTTATCTCTTCCCAGCTAGTACTTGCAGCTTTCATGTTTGGAAACACTTGTAAGAACATATTTGAAGCTATCATCTTCGTGTTTGTGATGCATCCATTTGATGTTGGTGATCGATGTGTTATTGATGGGGTTGAGCTATTGGTTGAAGAAATGAATATATTGACCACAGTCTTCTTGAAGCTTAACAATGAAAAAGTGTACTATCCAAACTCTGTCTTGGCCATGAAACCGATTAGCAATTATTACAGAAGCCCAGATATGGGTGACCGTGTAGAGTTCTCAATTGATTTTACAACACCAGCTGAGAAAATTGGGGCACTGAGAGAAAAAGTAAAGAGGTACCTGGAGAGAAATCCCCAATACTGGCACCCTAATTATGGCTTAGTAGTGAAGGACATTGAAGACGTAAACAAGATTAAGATGGGTATATACGTTACCCACACAATGAACTTTCAAGAGTTTGGGGAGAAAAACAGGAGAAGAACTGAACTGGTGATGGAAATAAAGAAAATATTTGAAGAACTCAACATCAGATACAACCTTCTTCCACAAGGCATTCATCTCAAACGTATAGAGCCAGACCCCGGGGTGCTCAATACATGA 2295 0.427 MDANYEKQGLQGGEVSMAEKKREVMVAIPNEGGGESLMAHRMLNDNEVAAKSPPLNCASPEIRFMPSPNKPPKVPTSNANLTRRKSLTRSVYSKPKSRFGEQPYPVDGTLLEENGTSTLQENLSVGSPYKASPINNKPGTVNRTVSILSVITPKTPLMASPGPAGGEDFDEIIYRKVELSKSKRSRRVTAKVLFEWFVFVCITSSLVASLTVGKLRRTEIWGLGIWRWCVLVLATFCGMLVTRWFMLIIVFLIETNFLLRKKVLYFVHGLKKCVQFFIWLGLVLLTWVLLINRGVHRSELATKILNGVTWTLVSILIGAFLWFVKTLLLKILASNFHVKSFFDRIQESLFHQYILQTLSGPPLVEEAEKVGASLSVGHFSFRSTDGKGGMKKETIDIAKLHQMKQEKVSAWTMKVLIDAMTNSGLSTISSALDESFDDGENEQTDKEITNEMEAIAAAYYIFRNVAAPGCTYIDEDELRRFMIKEEVRMVYPLLAEAETGQITRKSLTDWLLKVYQERKALAHALSDTKTAVRQLNKLVTVILIVVNIIVWLLLMEIATTKVLVFISSQLVLAAFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVIDGVELLVEEMNILTTVFLKLNNEKVYYPNSVLAMKPISNYYRSPDMGDRVEFSIDFTTPAEKIGALREKVKRYLERNPQYWHPNYGLVVKDIEDVNKIKMGIYVTHTMNFQEFGEKNRRRTELVMEIKKIFEELNIRYNLLPQGIHLKRIEPDPGVLNT 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00623 764 Gene3D - 596 645 IPR023408 -
Phco7g00623 764 PIRSF Memb_At2g17000 27 759 IPR016688 -
Phco7g00623 764 FunFam Predicted mechanosensitive ion channel 596 645 - -
Phco7g00623 764 SUPERFAMILY Sm-like ribonucleoproteins 586 645 IPR010920 -
Phco7g00623 764 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 75 757 IPR016688 -
Phco7g00623 764 Pfam Mechanosensitive ion channel 536 742 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00623 Phco-Chr7 4715840 4718792 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00623 7 4715840 4718792 Phco7g00623 7 4715840 4718792 ECH