Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco7g00616 | ATGGCTCAGGCATTTGGAAAAGCCATAGCAAAACCTTGTTCTACTTCCTCATCTTCTTCATCCACCATTCCAATCCCAAATGTCTGCCTCATAACCTCCATCACCTCAATCCTTCAAAACCTAAATCCCCAAATCCCAGATTTCTCACCTCTCACAAAATTGTCCCCGCACCTCACCCCAGACTTGGTCGTTCAGGTGATCCAGAACCAAAAGAACCCACACCACGCCCTTCACTTCTTCAACTGGGCTTCCAATCCCAACCCCAACCCTAAGAACTACTCCCACACCCCCTTCTGCTACGCCGCCATCACCGACCTCTTGCTCTCCCACTCCCTCTTCTCCACCGCCTACTCCCTCCTCCGCCACTCCAACAAACTCTCCGACTTCCTCATCTGCAGATTCATCAACGCTCTCGGCCACTGCGGCGATATCAGGGGTGCCATTCACTGGTTCCACAAAGCCAAAAACTTGGGAACAGGACGCCGCGTCTATTCATGCAATGCCATCTTGGGCGTGCTCGTCAGGGCCAACCGTATTAATTTTGCCAAGGCCATCTACGACCAGGTCCTCGCAGAAGCTGTGGTGGAACCCGATGTTTACACTCACACCACCATGATTCGTGGTTTTTGCAAAGTGGGCATGGTCGAGAGTGCGCGCAAGGTGTTCGACGATATGCGCTGCGAACCCAACATGGTTACTTACAACACGTTGATCCACGGGTTTTGTAAGAGGGGTGACATGGAGGGTGCCAGGTGGGTTTTTGACAGATTGGTGGAGAGTAAGAGTTGTGAGCCGGATGTGGTGAGTTTCACCACTTTGATTTATGGGTATTCGAAGAGAGGTGAATTCCAAAAGGCGGTGGAGTGTCTGAAGGAGATGATGGAACGAGGGTGTTCTCCGAATGTTGTGACCTACAATGCCTTGGTTGAAGGTCTTTGTTTGAGGGGAGAAGTGGATGAGGCAAAGAAGATGATGAGTAGGATGCGGTTGAATGGTCTGAAGGACAACGTCGCCACAAATACCAGCTTGTTGAAGGGGTTCTGTATCGTGGGAAAGTCTGATGAAGCTTTTAAGCATTTGAGGGAAATGGTTAGTCGGGGGATGAAGCCGGATGTGAAAGCATATGGGGTTGTTGTGAATGAGTATTGCAAGATTGGAAAACCAAGAGAAGCAGTCTCACTTCTGAGAGAAATGGTGACGAGGGGTGTTAAGCCAAGTGTGTCAAGCTTCAATGCTGTGTTTAGAGTTCTTGTGGATGAGGGGAAGATTGATGAAGGGGTTCTTCTTTTGAAGCAGATGAGTCAGATGGGATGCTCACCCAACTTCTTGTCATATTGCATATTGATATGTGCCCTCTGTAAAGTGAAGGGTAGGATGCAGGCCGTTGAAGAGCTTGTTTCGGACATGCTTCAGAATGGACATAACCTGGATGCCACTATGTATAGCTGCTTACTTGAGGGATATTGTGAAGACGGGGACGAAGAAATGGCACTAAAGACATTTTATGACCTTATGAACAAGAATTTTGTAATCAAGCAAGACATTTTCTGCACTTTTGTGAAGGTGTTGTGTGCAAAGGGCAAATTGAAAGAGGGGGAGACAGTGTTTGAGGGGATGCTTGCTCAGGGGATTCCTGTTAAGTGGGAAAGCTGA | 1653 | 0.4846 | MAQAFGKAIAKPCSTSSSSSSTIPIPNVCLITSITSILQNLNPQIPDFSPLTKLSPHLTPDLVVQVIQNQKNPHHALHFFNWASNPNPNPKNYSHTPFCYAAITDLLLSHSLFSTAYSLLRHSNKLSDFLICRFINALGHCGDIRGAIHWFHKAKNLGTGRRVYSCNAILGVLVRANRINFAKAIYDQVLAEAVVEPDVYTHTTMIRGFCKVGMVESARKVFDDMRCEPNMVTYNTLIHGFCKRGDMEGARWVFDRLVESKSCEPDVVSFTTLIYGYSKRGEFQKAVECLKEMMERGCSPNVVTYNALVEGLCLRGEVDEAKKMMSRMRLNGLKDNVATNTSLLKGFCIVGKSDEAFKHLREMVSRGMKPDVKAYGVVVNEYCKIGKPREAVSLLREMVTRGVKPSVSSFNAVFRVLVDEGKIDEGVLLLKQMSQMGCSPNFLSYCILICALCKVKGRMQAVEELVSDMLQNGHNLDATMYSCLLEGYCEDGDEEMALKTFYDLMNKNFVIKQDIFCTFVKVLCAKGKLKEGETVFEGMLAQGIPVKWES | 550 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco7g00616 | 550 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 230 | 265 | IPR002885 | - | |
| Phco7g00616 | 550 | PANTHER | TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED | 48 | 425 | - | - | |
| Phco7g00616 | 550 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 266 | 300 | IPR002885 | - | |
| Phco7g00616 | 550 | SUPERFAMILY | TPR-like | 66 | 432 | IPR011990 | GO:0005515 | |
| Phco7g00616 | 550 | Gene3D | Tetratricopeptide repeat domain | 329 | 401 | IPR011990 | GO:0005515 | |
| Phco7g00616 | 550 | Gene3D | Tetratricopeptide repeat domain | 48 | 222 | IPR011990 | GO:0005515 | |
| Phco7g00616 | 550 | Pfam | PPR repeat | 516 | 544 | IPR002885 | - | |
| Phco7g00616 | 550 | Pfam | PPR repeat | 480 | 508 | IPR002885 | - | |
| Phco7g00616 | 550 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 406 | 440 | IPR002885 | - | |
| Phco7g00616 | 550 | Pfam | PPR repeat | 195 | 226 | IPR002885 | - | |
| Phco7g00616 | 550 | Pfam | PPR repeat | 227 | 256 | IPR002885 | - | |
| Phco7g00616 | 550 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 198 | 228 | IPR002885 | - | |
| Phco7g00616 | 550 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 371 | 405 | IPR002885 | - | |
| Phco7g00616 | 550 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 336 | 370 | IPR002885 | - | |
| Phco7g00616 | 550 | Pfam | PPR repeat family | 336 | 384 | IPR002885 | - | |
| Phco7g00616 | 550 | Pfam | PPR repeat family | 405 | 454 | IPR002885 | - | |
| Phco7g00616 | 550 | Pfam | PPR repeat family | 265 | 313 | IPR002885 | - | |
| Phco7g00616 | 550 | Gene3D | Tetratricopeptide repeat domain | 223 | 328 | IPR011990 | GO:0005515 | |
| Phco7g00616 | 550 | Gene3D | Tetratricopeptide repeat domain | 420 | 550 | IPR011990 | GO:0005515 | |
| Phco7g00616 | 550 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 441 | 476 | IPR002885 | - | |
| Phco7g00616 | 550 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 477 | 511 | IPR002885 | - | |
| Phco7g00616 | 550 | NCBIfam | pentatricopeptide repeat | 200 | 228 | IPR002885 | - | |
| Phco7g00616 | 550 | NCBIfam | pentatricopeptide repeat | 374 | 407 | IPR002885 | - | |
| Phco7g00616 | 550 | NCBIfam | pentatricopeptide repeat | 268 | 302 | IPR002885 | - | |
| Phco7g00616 | 550 | NCBIfam | pentatricopeptide repeat | 232 | 267 | IPR002885 | - | |
| Phco7g00616 | 550 | NCBIfam | pentatricopeptide repeat | 515 | 545 | IPR002885 | - | |
| Phco7g00616 | 550 | NCBIfam | pentatricopeptide repeat | 409 | 441 | IPR002885 | - | |
| Phco7g00616 | 550 | NCBIfam | pentatricopeptide repeat | 480 | 510 | IPR002885 | - | |
| Phco7g00616 | 550 | NCBIfam | pentatricopeptide repeat | 341 | 372 | IPR002885 | - | |
| Phco7g00616 | 550 | NCBIfam | pentatricopeptide repeat | 303 | 333 | IPR002885 | - | |
| Phco7g00616 | 550 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 301 | 335 | IPR002885 | - |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco7g00616 | 7 | 4669426 | 4671078 | Phco7g00616 | 7 | 4669426 | 4671078 | ECH |